| Basic Information | |
|---|---|
| Species | Eucalyptus grandis |
| Cazyme ID | Eucgr.J00862.1 |
| Family | CBM49 |
| Protein Properties | Length: 576 Molecular Weight: 63825.8 Isoelectric Point: 6.8965 |
| Chromosome | Chromosome/Scaffold: 10 Start: 9273456 End: 9277414 |
| Description | glycosyl hydrolase 9C1 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CBM49 | 484 | 562 | 7.3e-25 |
| VQFLHSITSSWSHGGAMYFRHQVIIKNTLQKPISDLKLQMENLSGPLWGLTPCQEKNIYHLPQSQVLKPGLQYTFVYVQ | |||
| GH9 | 11 | 469 | 0 |
| YGDAVEKSLMFFEAQRSGKLPTDQQVKWRGDSALHDGFSQGVDLVGGYYDAGDHVKFGLPMAFTITMLAWGVAEFRKEITGLNQMDHTLRAIRWGTDYIL KAHPQPDVLWAQVGDGNSDHYCWERAEDMTTPRTAYKLDHENPGSDLAGETAAALAAASMAFRPYNSSYSNLLLAHAKQLFSFADRFRGQYDDSIQSAQQ FYPSSSYSDELLWGATWLYRATGDQKYLQYAIDNAESMGGISWGVKEFSWDTKYAGVQVLLSKVLMDNPYSPHASILKQYQAKAEYFMCACMQKNNGYNV NRTPGGLMYMHEWNNMQYVSSASFLLAVYSGYLSPSKAKVTCPNGEVQPQDLLNFAKSQGDYILGKNPKSISYLVGYGQSYPTHVHHRGASIAPISVLQS PVKCVQGFDAWYHRPQGNPNVIYGALVGGPDKNDGFYDDRSNYEQTEPTLSACAPLIGL | |||
| Full Sequence |
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| Protein Sequence Length: 576 Download |
| MSGSSATAAG YGDAVEKSLM FFEAQRSGKL PTDQQVKWRG DSALHDGFSQ GVDLVGGYYD 60 AGDHVKFGLP MAFTITMLAW GVAEFRKEIT GLNQMDHTLR AIRWGTDYIL KAHPQPDVLW 120 AQVGDGNSDH YCWERAEDMT TPRTAYKLDH ENPGSDLAGE TAAALAAASM AFRPYNSSYS 180 NLLLAHAKQL FSFADRFRGQ YDDSIQSAQQ FYPSSSYSDE LLWGATWLYR ATGDQKYLQY 240 AIDNAESMGG ISWGVKEFSW DTKYAGVQVL LSKVLMDNPY SPHASILKQY QAKAEYFMCA 300 CMQKNNGYNV NRTPGGLMYM HEWNNMQYVS SASFLLAVYS GYLSPSKAKV TCPNGEVQPQ 360 DLLNFAKSQG DYILGKNPKS ISYLVGYGQS YPTHVHHRGA SIAPISVLQS PVKCVQGFDA 420 WYHRPQGNPN VIYGALVGGP DKNDGFYDDR SNYEQTEPTL SACAPLIGLF SKLQSAYGAP 480 ESPVQFLHSI TSSWSHGGAM YFRHQVIIKN TLQKPISDLK LQMENLSGPL WGLTPCQEKN 540 IYHLPQSQVL KPGLQYTFVY VQGGPQAKIS VVSYH* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02340 | PLN02340 | 0 | 5 | 575 | 590 | + endoglucanase | ||
| PLN02171 | PLN02171 | 0 | 11 | 574 | 599 | + endoglucanase | ||
| PLN02420 | PLN02420 | 0 | 11 | 473 | 465 | + endoglucanase | ||
| PLN00119 | PLN00119 | 0 | 6 | 473 | 468 | + endoglucanase | ||
| pfam00759 | Glyco_hydro_9 | 0 | 11 | 471 | 463 | + Glycosyl hydrolase family 9. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005576 | extracellular region |
| GO:0005975 | carbohydrate metabolic process |
| GO:0030246 | carbohydrate binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI27137.1 | 0 | 1 | 575 | 20 | 615 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_175323.1 | 0 | 11 | 575 | 31 | 627 | AtGH9C1 (Arabidopsis thaliana glycosyl hydrolase 9C1); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
| RefSeq | XP_002277177.1 | 0 | 15 | 575 | 1 | 575 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002310080.1 | 0 | 6 | 575 | 23 | 611 | glycosyl hydrolase family 9 [Populus trichocarpa] |
| RefSeq | XP_002527135.1 | 0 | 5 | 575 | 23 | 620 | endo-1,4-beta-glucanase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ksd_A | 0 | 11 | 469 | 5 | 431 | A Chain A, Lip5(mit)2 |
| PDB | 1ksc_A | 0 | 11 | 469 | 5 | 431 | A Chain A, Lip5(mit)2 |
| PDB | 1ks8_A | 0 | 11 | 469 | 5 | 431 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 2xfg_A | 0 | 8 | 478 | 23 | 464 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
| PDB | 4tf4_B | 0 | 8 | 573 | 3 | 518 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HO783495 | 378 | 14 | 390 | 0 |
| DY968162 | 271 | 172 | 442 | 0 |
| DY287831 | 339 | 11 | 348 | 0 |
| DY274365 | 358 | 11 | 365 | 0 |
| DY276095 | 314 | 56 | 367 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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