| Basic Information | |
|---|---|
| Species | Eucalyptus grandis |
| Cazyme ID | Eucgr.J01181.1 |
| Family | GH2 |
| Protein Properties | Length: 1110 Molecular Weight: 124758 Isoelectric Point: 5.8537 |
| Chromosome | Chromosome/Scaffold: 10 Start: 12908686 End: 12920428 |
| Description | glycoside hydrolase family 2 protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH2 | 88 | 977 | 0 |
| KSLSGHWKFLMAPSPKDVPGGFFDAAFEDSAWGSLPVPSNWQMHGYDRPIYTNTLYPFPLDPPNIPLENPTGCYRTYFSIPNEWKGRRILLHFEAVDSAF CAWINGVFVGYSQDSRLPAEFEITDYCKPSAEENNVLAVQVFRWSDGSYLEDQDHWWLSGIHRDVLLLAKPQVFIADYFFKSNLDDKFMCADLQVEVKID DSRQKPSDSILSDLIIEAKLFDTSIWYNKDGHVDLLSSNVSDLKFNNSSSIHGFHDFILDGKLERPRLWSAEHPNLYTLVVILKDSGGHVIDCESCQVGI RQISTAHKQLLVNGHPVIIRGVNRHEHHPRLGKTNMESCMVKDLVLMKQNNMNAVRNSHYPQHTRWYQLCDLFGMYMIDEANIETHGFVDCKDRKHPTLE PSWAGAMLDRVIGMVERDKNHACIISWSLGNESGYGPNHSASAGWVRGKDPSRVLHYEGGGARTSSTDIVCPMYMRVWDIVKIAKDPNETRPLILCEYSH SMGNSNGNILEYWEAIDSTFGLQGGFIWDWVDQGLLKEKADGCKHWAYGGDFGDIPNDLNFCLNGLTWPDRTPHPAMHEVKYVHQPIKVLLNGITLKIRN THFYETTEGLEFSWLIHGDGCNLGSGTLSLPIVGPQSSFDIELEKGPWYSVWASCYATEIFLTISAKLLHSTRWTEAGHIVSSTQVQLPAKEVLAHHAIK VESGTFSKEVSGDTIRVCHQNNWEIKFNIQKGTFESWKVQGVPVMGSGILPCFWRAPTDNDKGGGSASYLSLWKAAHLDSLSVVTESCSIEQDSATLLKI KTVYHFIVQGEEGSLSQSGKSIVVFECDVIYSIYCSGDVIMEYHVRPSSNLPPLPRVGVEFHLESSLERIQWYGRGPFECYPDRKAAAHV | |||
| Full Sequence |
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| Protein Sequence Length: 1110 Download |
| MASLLAQLGL PLENGFQAWE DQSFFKLRKR DAHVTLHCHD SVEGALKYWF ERGKVDFTLA 60 DSAAWDDDAV DSALDCAASW VKGLPFAKSL SGHWKFLMAP SPKDVPGGFF DAAFEDSAWG 120 SLPVPSNWQM HGYDRPIYTN TLYPFPLDPP NIPLENPTGC YRTYFSIPNE WKGRRILLHF 180 EAVDSAFCAW INGVFVGYSQ DSRLPAEFEI TDYCKPSAEE NNVLAVQVFR WSDGSYLEDQ 240 DHWWLSGIHR DVLLLAKPQV FIADYFFKSN LDDKFMCADL QVEVKIDDSR QKPSDSILSD 300 LIIEAKLFDT SIWYNKDGHV DLLSSNVSDL KFNNSSSIHG FHDFILDGKL ERPRLWSAEH 360 PNLYTLVVIL KDSGGHVIDC ESCQVGIRQI STAHKQLLVN GHPVIIRGVN RHEHHPRLGK 420 TNMESCMVKD LVLMKQNNMN AVRNSHYPQH TRWYQLCDLF GMYMIDEANI ETHGFVDCKD 480 RKHPTLEPSW AGAMLDRVIG MVERDKNHAC IISWSLGNES GYGPNHSASA GWVRGKDPSR 540 VLHYEGGGAR TSSTDIVCPM YMRVWDIVKI AKDPNETRPL ILCEYSHSMG NSNGNILEYW 600 EAIDSTFGLQ GGFIWDWVDQ GLLKEKADGC KHWAYGGDFG DIPNDLNFCL NGLTWPDRTP 660 HPAMHEVKYV HQPIKVLLNG ITLKIRNTHF YETTEGLEFS WLIHGDGCNL GSGTLSLPIV 720 GPQSSFDIEL EKGPWYSVWA SCYATEIFLT ISAKLLHSTR WTEAGHIVSS TQVQLPAKEV 780 LAHHAIKVES GTFSKEVSGD TIRVCHQNNW EIKFNIQKGT FESWKVQGVP VMGSGILPCF 840 WRAPTDNDKG GGSASYLSLW KAAHLDSLSV VTESCSIEQD SATLLKIKTV YHFIVQGEEG 900 SLSQSGKSIV VFECDVIYSI YCSGDVIMEY HVRPSSNLPP LPRVGVEFHL ESSLERIQWY 960 GRGPFECYPD RKAAAHVSVY EENVADMHVP YIVPGECAGR ADVRWVTFQN RDGVGIYASI 1020 YGSSPPMQMS ASYYSTSELD RATHNEDLVR GSSIEVHLDH KHMGLGGDDS WSPCVHEKYL 1080 VPPLPYSFAI RLSPVISASN GYEIYKSQL* 1140 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| smart01038 | Bgal_small_N | 2.0e-94 | 808 | 1092 | 286 | + Beta galactosidase small chain. This domain comprises the small chain of dimeric beta-galactosidases EC:3.2.1.23. This domain is also found in single chain beta-galactosidase. | ||
| pfam02836 | Glyco_hydro_2_C | 8.0e-105 | 395 | 675 | 291 | + Glycosyl hydrolases family 2, TIM barrel domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities. | ||
| COG3250 | LacZ | 3.0e-157 | 88 | 975 | 896 | + Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism] | ||
| PRK09525 | lacZ | 0 | 85 | 1094 | 1042 | + beta-D-galactosidase; Reviewed | ||
| PRK10340 | ebgA | 0 | 88 | 1095 | 1015 | + cryptic beta-D-galactosidase subunit alpha; Reviewed | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0004565 | beta-galactosidase activity |
| GO:0005975 | carbohydrate metabolic process |
| GO:0009341 | beta-galactosidase complex |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_002266400.1 | 0 | 1 | 1109 | 1 | 1112 | PREDICTED: hypothetical protein isoform 1 [Vitis vinifera] |
| RefSeq | XP_002266434.1 | 0 | 1 | 1109 | 1 | 1113 | PREDICTED: hypothetical protein isoform 2 [Vitis vinifera] |
| RefSeq | XP_002299206.1 | 0 | 1 | 1109 | 1 | 1108 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002303929.1 | 0 | 1 | 1109 | 1 | 1111 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002513059.1 | 0 | 1 | 1108 | 1 | 1107 | beta-galactosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1jz2_D | 0 | 88 | 1090 | 52 | 1018 | A Chain A, Structure Of The Thermostable Pectate Lyase Pl 47 |
| PDB | 1jz2_C | 0 | 88 | 1090 | 52 | 1018 | A Chain A, Structure Of The Thermostable Pectate Lyase Pl 47 |
| PDB | 1jz2_B | 0 | 88 | 1090 | 52 | 1018 | A Chain A, Structure Of The Thermostable Pectate Lyase Pl 47 |
| PDB | 1jz2_A | 0 | 88 | 1090 | 52 | 1018 | A Chain A, Structure Of The Thermostable Pectate Lyase Pl 47 |
| PDB | 1jz1_P | 0 | 88 | 1090 | 52 | 1018 | A Chain A, Structure Of The Thermostable Pectate Lyase Pl 47 |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO804274 | 385 | 129 | 508 | 0 |
| ES794486 | 302 | 449 | 750 | 0 |
| EL444301 | 296 | 436 | 731 | 0 |
| HO804274 | 50 | 499 | 547 | 0.000000004 |
| ES794486 | 52 | 749 | 800 | 0.015 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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