Basic Information | |
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Species | Eucalyptus grandis |
Cazyme ID | Eucgr.J01349.1 |
Family | GT5 |
Protein Properties | Length: 791 Molecular Weight: 87994.1 Isoelectric Point: 5.7109 |
Chromosome | Chromosome/Scaffold: 10 Start: 16128326 End: 16135175 |
Description | starch synthase 2 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT5 | 300 | 783 | 0 |
NIILVAAECAPWSKTGGLGDVAGSLPKALARRGHRVMVVAPRYGNYAEAQQIGERKRYKVDGQDHEVSYFQAYIDGVDFVFIDSPMFRHIENNIYGGNRV DILKRMVLFCKAAVEVPWHVPCGGICYGDGNLVFIANDWHTALLPVYLKAYYRDNGLMSFTRSILVIHNIAHQGRGPVDDFSFVDLPPHYIDLFKLYDPL GGDHFNIFAAGLKTADRVVTVSHGYAWELKTSEGGWGLHNIINEMDWKLRGIVNGIDTKEWSPQYDVHLKSDGYTNYSLENLQTGKAQCKEAFQRELGLP VHPNVPLLGFIGRLDHQKGVDLIAEAVPWLMGQDVQLVMLGTGRQDLEQMLRQFEGQHRDKIRGWVGFSVKMAHRITAASDILLMPSRFEPCGLNQLYAM SYGTIPVVHAVGGLRDTVEPFDPFNNTGLGWTFDSAEANKLINALGYCLMTYRQYKESWEGIQRRGMTKDLSWDNAARNYEEVL |
Full Sequence |
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Protein Sequence Length: 791 Download |
MASLGSLQFL SEPKAESSLL LYCINRRRPR SGSCGYWPRK SPVPLHLRGL SCGFSRSRDA 60 EDGWLKCSFC RGRMSGLYDR GQFLSVRAAG MGSAEGDDGD SLETEDKLQA TIEKSKRVLA 120 MQRDLLNQIA ERRKLVSTIK NSTISATEAE TAYENGMSTS SHQDVASTSD NYTTFEDNVL 180 GQTNGQSFSG SPLHSTKEAP ESVLTKEPDK AERNLESQFS SKVTPSSSDS PEHSNNISSV 240 SVQSTEMPSF LSSTLEVEPL EVEQNESLKE SSLQNVDNET ADPVSEDMEP PPLAGPNVMN 300 IILVAAECAP WSKTGGLGDV AGSLPKALAR RGHRVMVVAP RYGNYAEAQQ IGERKRYKVD 360 GQDHEVSYFQ AYIDGVDFVF IDSPMFRHIE NNIYGGNRVD ILKRMVLFCK AAVEVPWHVP 420 CGGICYGDGN LVFIANDWHT ALLPVYLKAY YRDNGLMSFT RSILVIHNIA HQGRGPVDDF 480 SFVDLPPHYI DLFKLYDPLG GDHFNIFAAG LKTADRVVTV SHGYAWELKT SEGGWGLHNI 540 INEMDWKLRG IVNGIDTKEW SPQYDVHLKS DGYTNYSLEN LQTGKAQCKE AFQRELGLPV 600 HPNVPLLGFI GRLDHQKGVD LIAEAVPWLM GQDVQLVMLG TGRQDLEQML RQFEGQHRDK 660 IRGWVGFSVK MAHRITAASD ILLMPSRFEP CGLNQLYAMS YGTIPVVHAV GGLRDTVEPF 720 DPFNNTGLGW TFDSAEANKL INALGYCLMT YRQYKESWEG IQRRGMTKDL SWDNAARNYE 780 EVLVAAKYQW * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PRK14099 | PRK14099 | 4.0e-84 | 299 | 787 | 516 | + glycogen synthase; Provisional | ||
COG0297 | GlgA | 1.0e-133 | 299 | 781 | 494 | + Glycogen synthase [Carbohydrate transport and metabolism] | ||
PRK00654 | glgA | 5.0e-165 | 299 | 782 | 495 | + glycogen synthase; Provisional | ||
TIGR02095 | glgA | 0 | 299 | 786 | 492 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
cd03791 | GT1_Glycogen_synthase_DULL1_like | 0 | 300 | 783 | 490 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. |
Gene Ontology | |
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GO Term | Description |
GO:0009058 | biosynthetic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAF13168.1 | 0 | 1 | 790 | 1 | 751 | AF173900_1 granule bound starch synthase II precursor [Manihot esculenta] |
GenBank | ABV25894.1 | 0 | 1 | 790 | 1 | 751 | starch synthase isoform II [Manihot esculenta] |
RefSeq | XP_002278470.1 | 0 | 1 | 790 | 1 | 772 | PREDICTED: similar to starch synthase [Vitis vinifera] |
RefSeq | XP_002324061.1 | 0 | 1 | 790 | 1 | 742 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002531856.1 | 0 | 1 | 790 | 1 | 754 | starch synthase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3vuf_A | 0 | 299 | 784 | 10 | 509 | A Chain A, The Crystal Structure Of A Hyperthermoactive Exopolygalacturonase From Thermotoga Maritima |
PDB | 3vue_A | 0 | 299 | 784 | 10 | 509 | A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain |
PDB | 3d1j_A | 0 | 299 | 782 | 1 | 472 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
PDB | 3guh_A | 0 | 299 | 789 | 1 | 479 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
PDB | 2r4u_A | 0 | 299 | 789 | 1 | 479 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO781048 | 393 | 399 | 791 | 0 |
HO445868 | 438 | 354 | 791 | 0 |
HO390058 | 467 | 334 | 791 | 0 |
HO411612 | 417 | 376 | 791 | 0 |
HO781048 | 41 | 358 | 398 | 0.054 |
Sequence Alignments (This image is cropped. Click for full image.) |
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