| Basic Information | |
|---|---|
| Species | Eucalyptus grandis |
| Cazyme ID | Eucgr.J01349.3 |
| Family | GT5 |
| Protein Properties | Length: 456 Molecular Weight: 51727.9 Isoelectric Point: 6.4068 |
| Chromosome | Chromosome/Scaffold: 10 Start: 16128631 End: 16135123 |
| Description | starch synthase 2 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT5 | 1 | 448 | 0 |
| MVVAPRYGNYAEAQQIGERKRYKVDGQDHEVSYFQAYIDGVDFVFIDSPMFRHIENNIYGGNRVDILKRMVLFCKAAVEVPWHVPCGGICYGDGNLVFIA NDWHTALLPVYLKAYYRDNGLMSFTRSILVIHNIAHQGRGPVDDFSFVDLPPHYIDLFKLYDPLGGDHFNIFAAGLKTADRVVTVSHGYAWELKTSEGGW GLHNIINEMDWKLRGIVNGIDTKEWSPQYDVHLKSDGYTNYSLENLQTGKAQCKEAFQRELGLPVHPNVPLLGFIGRLDHQKGVDLIAEAVPWLMGQDVQ LVMLGTGRQDLEQMLRQFEGQHRDKIRGWVGFSVKMAHRITAASDILLMPSRFEPCGLNQLYAMSYGTIPVVHAVGGLRDTVEPFDPFNNTGLGWTFDSA EANKLINALGYCLMTYRQYKESWEGIQRRGMTKDLSWDNAARNYEEVL | |||
| Full Sequence |
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| Protein Sequence Length: 456 Download |
| MVVAPRYGNY AEAQQIGERK RYKVDGQDHE VSYFQAYIDG VDFVFIDSPM FRHIENNIYG 60 GNRVDILKRM VLFCKAAVEV PWHVPCGGIC YGDGNLVFIA NDWHTALLPV YLKAYYRDNG 120 LMSFTRSILV IHNIAHQGRG PVDDFSFVDL PPHYIDLFKL YDPLGGDHFN IFAAGLKTAD 180 RVVTVSHGYA WELKTSEGGW GLHNIINEMD WKLRGIVNGI DTKEWSPQYD VHLKSDGYTN 240 YSLENLQTGK AQCKEAFQRE LGLPVHPNVP LLGFIGRLDH QKGVDLIAEA VPWLMGQDVQ 300 LVMLGTGRQD LEQMLRQFEG QHRDKIRGWV GFSVKMAHRI TAASDILLMP SRFEPCGLNQ 360 LYAMSYGTIP VVHAVGGLRD TVEPFDPFNN TGLGWTFDSA EANKLINALG YCLMTYRQYK 420 ESWEGIQRRG MTKDLSWDNA ARNYEEVLVA AKYQW* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK14099 | PRK14099 | 1.0e-77 | 100 | 452 | 359 | + glycogen synthase; Provisional | ||
| COG0297 | GlgA | 2.0e-111 | 2 | 446 | 451 | + Glycogen synthase [Carbohydrate transport and metabolism] | ||
| PRK00654 | glgA | 5.0e-139 | 39 | 447 | 416 | + glycogen synthase; Provisional | ||
| cd03791 | GT1_Glycogen_synthase_DULL1_like | 2.0e-173 | 1 | 448 | 454 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
| TIGR02095 | glgA | 0 | 1 | 451 | 455 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009058 | biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABV25894.1 | 0 | 1 | 455 | 297 | 751 | starch synthase isoform II [Manihot esculenta] |
| Swiss-Prot | Q43847 | 0 | 1 | 455 | 313 | 767 | SSY2_SOLTU RecName: Full=Granule-bound starch synthase 2, chloroplastic/amyloplastic; AltName: Full=Granule-bound starch synthase II; Short=GBSS-II; Short=SS II; Flags: Precursor |
| RefSeq | XP_002278470.1 | 0 | 1 | 455 | 318 | 772 | PREDICTED: similar to starch synthase [Vitis vinifera] |
| RefSeq | XP_002324061.1 | 0 | 1 | 455 | 288 | 742 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002531856.1 | 0 | 1 | 455 | 300 | 754 | starch synthase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3vuf_A | 0 | 1 | 449 | 47 | 509 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 3vue_A | 0 | 1 | 449 | 47 | 509 | A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain |
| PDB | 3guh_A | 0 | 100 | 447 | 135 | 472 | A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain |
| PDB | 2r4u_A | 0 | 100 | 447 | 135 | 472 | A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain |
| PDB | 2r4t_A | 0 | 100 | 447 | 135 | 472 | A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HO781048 | 395 | 62 | 456 | 0 |
| HO445868 | 438 | 19 | 456 | 0 |
| HO390058 | 413 | 45 | 456 | 0 |
| HO781048 | 41 | 23 | 63 | 0.036 |
| HO390058 | 25 | 19 | 43 | 2.9 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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