y
Basic Information | |
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Species | Eucalyptus grandis |
Cazyme ID | Eucgr.J01374.1 |
Family | GT35 |
Protein Properties | Length: 963 Molecular Weight: 108725 Isoelectric Point: 5.8341 |
Chromosome | Chromosome/Scaffold: 10 Start: 16947476 End: 16959815 |
Description | Glycosyl transferase, family 35 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT35 | 176 | 956 | 0 |
ALSKLGHDLENVAAQEADAALGNGGLGRLASCFLDSLATLNYPAWGYGLRYRYGLFKQRITKDGQEEVAESWLEMGNPWEVVRNDVSYPVKFYGKVVSGS DGKRRWIGGEDIRAAAFDVPIPGYKTKNTINLRLWSTKVLSEEFDLSAFNAGEHTKANEALSNAEKICYILYPGDESIEGKILRLKQQYTLCSASLQDII ARFEKLSGKHVKWEDFPEKVAVQMNDTHPTLCIPELMRILMDVKGLSWKEAWNITRRTVAYTNHTVLPEALEKWSLELMQKLLPRHVEIIEMIDEELVGT IIAECGTENPGLLEKKLKEMRILENVDLPPAFAELIKPEEDPVASSEKEPETSKELDINLEDEPHNLQAQENNEELPEPEPEPPKMVRMANLCVVCSHAV NGVAEIHSEIVKKEVFHEFFKLWPEKFQNKTNGVTPRRWIPFCNPELSKIITRWIGTEDWILHTDKLAELRKFADNEDLQTQWRAAKRSNKMKVVRFLKE TTGYVVSPEAMFDIQVKRIHEYKRQLLNILGIVYRYKKMKAMNSAERTAKFVPRVCIFGGKAFATYVQAKRIVKFITDVAATINHDPEIGNLLKVIFVPD YNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCVLIGTLDGANVEIRQEVGEDNFFLFGAQAHEIAGLRKERAEGKFVPDPRFEEVKAFVKSGV FGPYNYDELIESLEGNEGFGRGDYFLVGKDFPSYIECQEEVDEAYRDEKRWTRMSILNTAGSHKFSSDRTIHEYARDIWNI |
Full Sequence |
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Protein Sequence Length: 963 Download |
MATSQLAATT PPLPSGDERF PRRQDQRRLL GSGLGEKKLA LLFRTRDARP LRTRRPSAVK 60 SVSGESKQRL KDSPLEEEPG SPSPLKPDAA SIASSIKYHA EFTAPFSPDQ FELPKAFFAT 120 AQSVRDALII NWNATYDYCE KLNVKQAYYL SMEFLQGRAL LNAIGNLELT GAYAEALSKL 180 GHDLENVAAQ EADAALGNGG LGRLASCFLD SLATLNYPAW GYGLRYRYGL FKQRITKDGQ 240 EEVAESWLEM GNPWEVVRND VSYPVKFYGK VVSGSDGKRR WIGGEDIRAA AFDVPIPGYK 300 TKNTINLRLW STKVLSEEFD LSAFNAGEHT KANEALSNAE KICYILYPGD ESIEGKILRL 360 KQQYTLCSAS LQDIIARFEK LSGKHVKWED FPEKVAVQMN DTHPTLCIPE LMRILMDVKG 420 LSWKEAWNIT RRTVAYTNHT VLPEALEKWS LELMQKLLPR HVEIIEMIDE ELVGTIIAEC 480 GTENPGLLEK KLKEMRILEN VDLPPAFAEL IKPEEDPVAS SEKEPETSKE LDINLEDEPH 540 NLQAQENNEE LPEPEPEPPK MVRMANLCVV CSHAVNGVAE IHSEIVKKEV FHEFFKLWPE 600 KFQNKTNGVT PRRWIPFCNP ELSKIITRWI GTEDWILHTD KLAELRKFAD NEDLQTQWRA 660 AKRSNKMKVV RFLKETTGYV VSPEAMFDIQ VKRIHEYKRQ LLNILGIVYR YKKMKAMNSA 720 ERTAKFVPRV CIFGGKAFAT YVQAKRIVKF ITDVAATINH DPEIGNLLKV IFVPDYNVSV 780 AELLIPASEL SQHISTAGME ASGTSNMKFA MNGCVLIGTL DGANVEIRQE VGEDNFFLFG 840 AQAHEIAGLR KERAEGKFVP DPRFEEVKAF VKSGVFGPYN YDELIESLEG NEGFGRGDYF 900 LVGKDFPSYI ECQEEVDEAY RDEKRWTRMS ILNTAGSHKF SSDRTIHEYA RDIWNIAPVG 960 VP* 1020 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00343 | Phosphorylase | 8.0e-135 | 176 | 499 | 324 | + Carbohydrate phosphorylase. The members of this family catalyze the formation of glucose 1-phosphate from one of the following polyglucoses; glycogen, starch, glucan or maltodextrin. | ||
TIGR02093 | P_ylase | 6.0e-170 | 96 | 500 | 408 | + glycogen/starch/alpha-glucan phosphorylases. This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
cd04300 | GT1_Glycogen_Phosphorylase | 0 | 93 | 956 | 873 | + This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. | ||
pfam00343 | Phosphorylase | 0 | 560 | 958 | 404 | + Carbohydrate phosphorylase. The members of this family catalyze the formation of glucose 1-phosphate from one of the following polyglucoses; glycogen, starch, glucan or maltodextrin. | ||
TIGR02093 | P_ylase | 0 | 560 | 956 | 402 | + glycogen/starch/alpha-glucan phosphorylases. This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources [Energy metabolism, Biosynthesis and degradation of polysaccharides]. |
Gene Ontology | |
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GO Term | Description |
GO:0004645 | phosphorylase activity |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI22291.1 | 0 | 27 | 962 | 24 | 982 | unnamed protein product [Vitis vinifera] |
Swiss-Prot | P53536 | 0 | 18 | 959 | 17 | 1000 | PHSL_VICFA RecName: Full=Alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic; AltName: Full=Starch phosphorylase L; Flags: Precursor |
RefSeq | XP_002279075.1 | 0 | 27 | 962 | 24 | 958 | PREDICTED: similar to Alpha-1,4 glucan phosphorylase L-1 isozyme, chloroplastic/amyloplastic [Vitis vinifera] |
RefSeq | XP_002305367.1 | 0 | 47 | 962 | 2 | 949 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002526085.1 | 0 | 41 | 962 | 39 | 977 | glycogen phosphorylase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1xoi_B | 0 | 88 | 958 | 23 | 829 | A Chain A, Human Liver Glycogen Phosphorylase A Complexed With Chloroindoloyl Glycine Amide |
PDB | 1xoi_A | 0 | 88 | 958 | 23 | 829 | A Chain A, Human Liver Glycogen Phosphorylase A Complexed With Chloroindoloyl Glycine Amide |
PDB | 3cem_B | 0 | 88 | 958 | 1 | 807 | A Chain A, Human Liver Glycogen Phosphorylase A Complexed With Chloroindoloyl Glycine Amide |
PDB | 3cem_A | 0 | 88 | 958 | 1 | 807 | A Chain A, Human Liver Glycogen Phosphorylase A Complexed With Chloroindoloyl Glycine Amide |
PDB | 3cej_B | 0 | 88 | 958 | 1 | 807 | A Chain A, Human Liver Glycogen Phosphorylase A Complexed With Chloroindoloyl Glycine Amide |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO778303 | 873 | 116 | 963 | 0 |
HO797178 | 401 | 563 | 963 | 0 |
HO613954 | 511 | 453 | 963 | 0 |
HO620767 | 403 | 561 | 963 | 0 |
HO778303 | 65 | 57 | 118 | 0.00005 |
Sequence Alignments (This image is cropped. Click for full image.) |
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