y
Basic Information | |
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Species | Eucalyptus grandis |
Cazyme ID | Eucgr.J02397.1 |
Family | CE8 |
Protein Properties | Length: 246 Molecular Weight: 26440.3 Isoelectric Point: 8.9277 |
Chromosome | Chromosome/Scaffold: 10 Start: 29877384 End: 29878967 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 51 | 241 | 0 |
GGFASGGAALRSVPIVNTCRVVISISAGTYRGKVEIPATMAYAAVKGADADKTAIEWADTADRIGPNGPPLGTFASATFAVNSPFFIAKSITFKNNAPLP ALRALGKEAVALRIAADAAAFVGCRFVGSQDTLYDHVGRHYIRNCYVEGSMDFVFGNGLPFYRGCHLYSASNRYGAVTAQKRESLLEETGF |
Full Sequence |
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Protein Sequence Length: 246 Download |
MQAMWFKVCL LLLLFASTIS TTPSFNSIDA RYRKWEGQEQ AQAMLEAERL GGFASGGAAL 60 RSVPIVNTCR VVISISAGTY RGKVEIPATM AYAAVKGADA DKTAIEWADT ADRIGPNGPP 120 LGTFASATFA VNSPFFIAKS ITFKNNAPLP ALRALGKEAV ALRIAADAAA FVGCRFVGSQ 180 DTLYDHVGRH YIRNCYVEGS MDFVFGNGLP FYRGCHLYSA SNRYGAVTAQ KRESLLEETG 240 FPLAR* 300 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02432 | PLN02432 | 7.0e-40 | 59 | 241 | 187 | + putative pectinesterase | ||
PLN02304 | PLN02304 | 5.0e-41 | 53 | 241 | 197 | + probable pectinesterase | ||
PLN02773 | PLN02773 | 4.0e-43 | 51 | 245 | 199 | + pectinesterase | ||
PLN02634 | PLN02634 | 6.0e-57 | 3 | 241 | 252 | + probable pectinesterase | ||
PLN02682 | PLN02682 | 2.0e-97 | 49 | 241 | 193 | + pectinesterase family protein |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI17409.1 | 0 | 48 | 245 | 71 | 268 | unnamed protein product [Vitis vinifera] |
GenBank | EEC79546.1 | 0 | 51 | 241 | 109 | 299 | hypothetical protein OsI_20666 [Oryza sativa Indica Group] |
RefSeq | XP_002266952.1 | 0 | 48 | 245 | 69 | 266 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002310842.1 | 0 | 49 | 241 | 48 | 239 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002531506.1 | 0 | 46 | 243 | 72 | 269 | Pectinesterase-2 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 5e-23 | 44 | 245 | 10 | 203 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 3uw0_A | 1e-20 | 53 | 229 | 44 | 234 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 1xg2_A | 2e-18 | 41 | 240 | 3 | 194 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 0.00000000000006 | 53 | 219 | 18 | 192 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 0.00000000000006 | 53 | 219 | 18 | 192 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |