Basic Information | |
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Species | Eucalyptus grandis |
Cazyme ID | Eucgr.J03011.1 |
Family | GT4 |
Protein Properties | Length: 727 Molecular Weight: 81703.9 Isoelectric Point: 10.562 |
Chromosome | Chromosome/Scaffold: 10 Start: 37304357 End: 37309506 |
Description | UDP-Glycosyltransferase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT4 | 585 | 697 | 2.9e-22 |
RYVKETLSFLFMHSNLSKSVLWTPATTRVASLYSAADVYVINSQGMGETFGRVTIEAMAFGLPVLGTDAGGTKEIVDHNETGLLHPPGGPGIEVLTRNIQ YLLREPALREQMG |
Full Sequence |
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Protein Sequence Length: 727 Download |
MEDGLNRGDP QGNFVRQSSL KQGGGTYKST LSGRSTPRSS PRRLHASRNP KREGRTGGVS 60 LQWFRNNRLV YWLLLITLWT YLGFYFQSRW AHGENRNEFL RFRNKLRKHD PDSHNNERRN 120 LIANHSTTAT KNETDVRLPE NKTIGVVLAN KGGGGSSPQI VARKKNKKSS RRSRGKARKR 180 APKVEIERPE LEEQEPEIPQ KNTTYGLLVG PFGKTEDKVL EWSPEKRSGT CDRKGDFARL 240 VWSRRFLLIF HELSMTGAPL SMMELATELL SCGATVSAVV LSRKGGLMSE LARRRIKVLE 300 DKADFSFKVG MKSDLVIAGS AVCASWIDKY MEHFPAGGSQ ITWWIMENRR EYFDRAKPVL 360 NRVKMVIFLS ESQSKQWLTW CEEEKIKLRY PPSVVPLSVN EELAFVAGIH SSLNTPSFST 420 ERMKEKRMLL RDSVRKEMGL TENDMLLISL SSINPAKGQL LLLESACSLI ENGSLQHSTK 480 VKTPAGLGKA QEEVNSTVKS HSRALFQELH DSESVSELPS YLDSLKNPKR KTSSLPGPMR 540 EHGIDTSSSE HIAQRRKTLS DSEGKPQQVL KVLIGSVGSK SNKVRYVKET LSFLFMHSNL 600 SKSVLWTPAT TRVASLYSAA DVYVINSQGM GETFGRVTIE AMAFGLPVLG TDAGGTKEIV 660 DHNETGLLHP PGGPGIEVLT RNIQYLLREP ALREQMGMKG RKKVEKMYLK RHIYKKFAVV 720 LSKCMR* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
TIGR00009 | L28 | 8.0e-21 | 613 | 705 | 93 | + ribosomal protein L28. This model describes bacterial and chloroplast forms of the 50S ribosomal protein L28, a polypeptide about 60 amino acids in length. Mitochondrial homologs differ substantially in architecture and are not included [Protein synthesis, Ribosomal proteins: synthesis and modification]. | ||
TIGR00072 | hydrog_prot | 5.0e-22 | 588 | 717 | 131 | + hydrogenase maturation protease. HycI and HoxM are well-characterized as responsible for C-terminal protease activity on their respective hydrogenase large chains. A large number of homologous proteins appear responsible for the maturation of various forms of hydrogenase. | ||
cd03825 | GT1_wcfI_like | 9.0e-23 | 611 | 716 | 113 | + This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis. | ||
cd03808 | GT1_cap1E_like | 2.0e-25 | 599 | 716 | 118 | + This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. | ||
cd03801 | GT1_YqgM_like | 3.0e-29 | 572 | 721 | 152 | + This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea. |
Gene Ontology | |
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GO Term | Description |
GO:0009058 | biosynthetic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN71826.1 | 0 | 1 | 726 | 1 | 732 | hypothetical protein [Vitis vinifera] |
EMBL | CBI36173.1 | 0 | 1 | 726 | 1 | 681 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002284822.1 | 0 | 15 | 726 | 4 | 689 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002298139.1 | 0 | 1 | 726 | 1 | 679 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002528176.1 | 0 | 1 | 726 | 1 | 684 | glycosyltransferase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jjm_L | 0.00000000002 | 493 | 726 | 155 | 387 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
PDB | 2jjm_K | 0.00000000002 | 493 | 726 | 155 | 387 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
PDB | 2jjm_J | 0.00000000002 | 493 | 726 | 155 | 387 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
PDB | 2jjm_I | 0.00000000002 | 493 | 726 | 155 | 387 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
PDB | 2jjm_H | 0.00000000002 | 493 | 726 | 155 | 387 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |