Basic Information | |
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Species | Eucalyptus grandis |
Cazyme ID | Eucgr.K00548.1 |
Family | GH5 |
Protein Properties | Length: 381 Molecular Weight: 42183.2 Isoelectric Point: 6.3726 |
Chromosome | Chromosome/Scaffold: 11 Start: 6172822 End: 6176853 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH5 | 18 | 342 | 4.4e-37 |
ANGKPLYLNGFNAYWMMYMASDPSTRDKVASVFQEAAKNGMNMARTWAFSDGVNRALQISPGIYNEDMFKGLDFVISEARRNGVYLIVSLVNNWNEFGGK NQYVRWARDSGQSLNNDDEFFTNSVTRGYYKNHVKAVLTRMNTVTGVAYKDDPTIFAWELMNEPQCKSDPSGKSLQDWVSEMAAYLKSIDSNHMLEVGLE GFYGQSVPGKQQNNPGSVLVGTDFISNNQVPQVDFATIHLYPDQWMPSASEGEQVAFADKWVQVHIQDSNTILKKPIILGEFGKSSNSSGYSVEKRDSYF GRLYDAIYTSASNQGSGAGALFWQL |
Full Sequence |
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Protein Sequence Length: 381 Download |
DGVGRSGFVG TNGIHFVANG KPLYLNGFNA YWMMYMASDP STRDKVASVF QEAAKNGMNM 60 ARTWAFSDGV NRALQISPGI YNEDMFKGLD FVISEARRNG VYLIVSLVNN WNEFGGKNQY 120 VRWARDSGQS LNNDDEFFTN SVTRGYYKNH VKAVLTRMNT VTGVAYKDDP TIFAWELMNE 180 PQCKSDPSGK SLQDWVSEMA AYLKSIDSNH MLEVGLEGFY GQSVPGKQQN NPGSVLVGTD 240 FISNNQVPQV DFATIHLYPD QWMPSASEGE QVAFADKWVQ VHIQDSNTIL KKPIILGEFG 300 KSSNSSGYSV EKRDSYFGRL YDAIYTSASN QGSGAGALFW QLFVQGMDSF GDGYVVILKQ 360 SPSTASVIAR QSRRMSALPR * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG2730 | BglC | 0.005 | 46 | 210 | 175 | + Endoglucanase [Carbohydrate transport and metabolism] | ||
pfam00150 | Cellulase | 4.0e-8 | 18 | 317 | 312 | + Cellulase (glycosyl hydrolase family 5). | ||
COG3934 | COG3934 | 9.0e-30 | 8 | 354 | 348 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABG88068.1 | 0 | 7 | 378 | 40 | 409 | endo-1,4-beta-mannanase [Glycine max] |
EMBL | CAC08442.1 | 0 | 9 | 378 | 45 | 415 | (1-4)-beta-mannan endohydrolase [Coffea arabica] |
EMBL | CAC51690.3 | 0 | 8 | 378 | 26 | 396 | endo-beta-1,4-mannanase [Lactuca sativa] |
RefSeq | XP_002302695.1 | 0 | 8 | 377 | 36 | 402 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002515142.1 | 0 | 8 | 378 | 36 | 403 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1rh9_A | 0 | 8 | 378 | 6 | 372 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzq_A | 0 | 17 | 342 | 21 | 342 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzo_A | 0 | 17 | 342 | 21 | 342 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzn_A | 0 | 17 | 342 | 21 | 342 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzm_A | 0 | 17 | 342 | 21 | 342 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
JK974111 | 378 | 1 | 378 | 0 |
HO794665 | 377 | 3 | 378 | 0 |
HO798074 | 359 | 22 | 380 | 0 |
DW067489 | 302 | 39 | 339 | 0 |
JZ191173 | 303 | 57 | 358 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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