Basic Information | |
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Species | Eucalyptus grandis |
Cazyme ID | Eucgr.K00550.1 |
Family | GH5 |
Protein Properties | Length: 374 Molecular Weight: 41482.4 Isoelectric Point: 5.1832 |
Chromosome | Chromosome/Scaffold: 11 Start: 6186969 End: 6189505 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH5 | 12 | 336 | 3e-35 |
ANGKPLYLNGFNAYWMMYLASDLSTRDKVTSTFQEAVKNGMNIARTLAFSDGVDRALQITPGVYNEEMFKGLDFVISEARKNGVYLILSLVNNWNDFGGK HQYVQWARNSGQSLDNDDDFFTNSVTKGYYKNHIKAVLTRMNTITGVAYKDDPTIFAWELMNEPQSLSDPSGKSLQDWVSEMAAYLKSIDSNHMLEVGLA GFYGQSVPGKQQNNPGGQLIGTDFISNTQVPQVDFSTIHLYPDQWLPNPSEKDQDAFADKWVQDHIQDSNTILNKPIILGEFGKSSKSSGYTIEKRDSYF GRLYDAIYASASNQGSCAGGLFWQV |
Full Sequence |
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Protein Sequence Length: 374 Download |
GFVGTKGIRF VANGKPLYLN GFNAYWMMYL ASDLSTRDKV TSTFQEAVKN GMNIARTLAF 60 SDGVDRALQI TPGVYNEEMF KGLDFVISEA RKNGVYLILS LVNNWNDFGG KHQYVQWARN 120 SGQSLDNDDD FFTNSVTKGY YKNHIKAVLT RMNTITGVAY KDDPTIFAWE LMNEPQSLSD 180 PSGKSLQDWV SEMAAYLKSI DSNHMLEVGL AGFYGQSVPG KQQNNPGGQL IGTDFISNTQ 240 VPQVDFSTIH LYPDQWLPNP SEKDQDAFAD KWVQDHIQDS NTILNKPIIL GEFGKSSKSS 300 GYTIEKRDSY FGRLYDAIYA SASNQGSCAG GLFWQVLAQG MDNFNDGYGV ILEQSPSTAS 360 VIAHQSRRML ALT* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG2730 | BglC | 0.002 | 42 | 294 | 278 | + Endoglucanase [Carbohydrate transport and metabolism] | ||
pfam00150 | Cellulase | 2.0e-11 | 12 | 311 | 308 | + Cellulase (glycosyl hydrolase family 5). | ||
COG3934 | COG3934 | 7.0e-25 | 10 | 310 | 307 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABG88068.1 | 0 | 1 | 373 | 40 | 410 | endo-1,4-beta-mannanase [Glycine max] |
EMBL | CAC08442.1 | 0 | 3 | 373 | 45 | 416 | (1-4)-beta-mannan endohydrolase [Coffea arabica] |
EMBL | CAC51690.3 | 0 | 2 | 372 | 26 | 396 | endo-beta-1,4-mannanase [Lactuca sativa] |
RefSeq | XP_002302695.1 | 0 | 2 | 369 | 36 | 400 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002515142.1 | 0 | 2 | 372 | 36 | 403 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1rh9_A | 0 | 2 | 373 | 6 | 373 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzq_A | 0 | 11 | 348 | 21 | 356 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzo_A | 0 | 11 | 348 | 21 | 356 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzn_A | 0 | 11 | 348 | 21 | 356 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzm_A | 0 | 11 | 348 | 21 | 356 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
JK974111 | 374 | 1 | 374 | 0 |
HO794665 | 375 | 1 | 374 | 0 |
HO798074 | 354 | 16 | 369 | 0 |
JZ191173 | 303 | 51 | 352 | 0 |
GR217808 | 301 | 1 | 301 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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