| Basic Information | |
|---|---|
| Species | Eucalyptus grandis |
| Cazyme ID | Eucgr.K00731.1 |
| Family | GT19 |
| Protein Properties | Length: 408 Molecular Weight: 45062.1 Isoelectric Point: 8.482 |
| Chromosome | Chromosome/Scaffold: 11 Start: 8464467 End: 8468570 |
| Description | transferases, transferring glycosyl groups |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
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| Family | Start | End | Evalue |
| GT19 | 47 | 334 | 0 |
| VFVVAGEVSGDTIASRLMACLKSLSPFPVRFAGVGGSMMSKQGLKSLFPMEDISVMGIWELIPHLGKIRVNLKETVDAALLFQPHVVVTVDSKGFSFRLL KLLRAGHYQQYADGPVHFHYVAPSFWAWKGGEARLANLAKFVDHIFCILPNEAEVCKLNGLSANFVGHPILEDALELNQGEDASRIQNLAGSRESFWSKY RVPSGGTIISLLPGSRLQEVARMLPIFAETVKMLKSSISELLTVVHVASNQHVEDYVDGFVQNWPVPVILVPGGETQPKYEALSSCFV | |||
| Full Sequence |
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| Protein Sequence Length: 408 Download |
| MAMVLRTARK LYGNRRRPCV SGVWRSHASM SGESVVGMAA RDGELRVFVV AGEVSGDTIA 60 SRLMACLKSL SPFPVRFAGV GGSMMSKQGL KSLFPMEDIS VMGIWELIPH LGKIRVNLKE 120 TVDAALLFQP HVVVTVDSKG FSFRLLKLLR AGHYQQYADG PVHFHYVAPS FWAWKGGEAR 180 LANLAKFVDH IFCILPNEAE VCKLNGLSAN FVGHPILEDA LELNQGEDAS RIQNLAGSRE 240 SFWSKYRVPS GGTIISLLPG SRLQEVARML PIFAETVKML KSSISELLTV VHVASNQHVE 300 DYVDGFVQNW PVPVILVPGG ETQPKYEALS SCFVYFWHRC CGNASCAATM CCCLPSSFSN 360 RVVYSLQSKD TIHLSPQYPF KCKCHSRSFV STMYTWEPDF FAHGTNP* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK01021 | lpxB | 8.0e-30 | 48 | 283 | 245 | + lipid-A-disaccharide synthase; Reviewed | ||
| TIGR00215 | lpxB | 2.0e-36 | 47 | 302 | 259 | + lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. | ||
| pfam02684 | LpxB | 4.0e-52 | 47 | 353 | 307 | + Lipid-A-disaccharide synthetase. This is a family of lipid-A-disaccharide synthetases, EC:2.4.2.128. These enzymes catalyze the reaction: UDP-2,3-bis(3-hydroxytetradecanoyl) glucosamine + 2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate <=> UDP + 2,3-bis(3-hydroxytetradecanoyl)-D-glucosaminyl-1,6 -beta-D-2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate. These enzymes catalyze the fist disaccharide step in the synthesis of lipid-A-disaccharide. | ||
| COG0763 | LpxB | 9.0e-71 | 45 | 332 | 290 | + Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane] | ||
| PRK00025 | lpxB | 4.0e-71 | 45 | 332 | 290 | + lipid-A-disaccharide synthase; Reviewed | ||
| Gene Ontology | |
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| GO Term | Description |
| GO:0008915 | lipid-A-disaccharide synthase activity |
| GO:0009245 | lipid A biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI28885.1 | 0 | 38 | 350 | 1 | 310 | unnamed protein product [Vitis vinifera] |
| GenBank | EEC71491.1 | 0 | 35 | 380 | 34 | 373 | hypothetical protein OsI_03760 [Oryza sativa Indica Group] |
| RefSeq | NP_178535.2 | 0 | 16 | 331 | 11 | 320 | transferase, transferring glycosyl groups [Arabidopsis thaliana] |
| RefSeq | XP_002458499.1 | 0 | 29 | 355 | 3 | 326 | hypothetical protein SORBIDRAFT_03g034785 [Sorghum bicolor] |
| RefSeq | XP_002528957.1 | 0 | 25 | 334 | 26 | 336 | Lipid-A-disaccharide synthase, putative [Ricinus communis] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| EY717263 | 303 | 83 | 381 | 0 |
| FY429474 | 243 | 33 | 274 | 0 |
| DT652350 | 254 | 29 | 278 | 0 |
| DV519136 | 259 | 29 | 283 | 0 |
| DW017982 | 215 | 38 | 251 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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