Basic Information | |
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Species | Eucalyptus grandis |
Cazyme ID | Eucgr.K01777.1 |
Family | CBM57 |
Protein Properties | Length: 475 Molecular Weight: 52863.2 Isoelectric Point: 9.2643 |
Chromosome | Chromosome/Scaffold: 11 Start: 22024954 End: 22034907 |
Description | Leucine-rich repeat transmembrane protein kinase |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM57 | 191 | 369 | 1.6e-29 |
INCGGSKAKVKGTTYEADSEEATPSSFFRSDYWAYSSTGYFTDYCSTAFSYVVKNTSTLSMNDAQLYKKARRSAISLTYYGFCLMDGPYNVILHFAEIMF TGDKSYQSLGKRDFNIYIQGKLVWKDFNIEIEAGGVGKEVMRNFTADVTKGTLEIRFYWAGKGSTGIPEDGVYGPLISA |
Full Sequence |
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Protein Sequence Length: 475 Download |
MGKIPDFIQN LTNLQKLSIQ GSGLQGPIPS GIARLERLND LRISDLDGPE SRVPQLNSKK 60 IETLILRSCN LMGELPGYLA NMTNLKILDL SFNKLSGKIP ISYSSLENVE YMYLTGNQLT 120 GAVPDWILEK GKNVDLSYNN FTARGSECQE GYVNLFASSE VENATSCSAT SGLVSCLQSQ 180 RCAKTQYNLF INCGGSKAKV KGTTYEADSE EATPSSFFRS DYWAYSSTGY FTDYCSTAFS 240 YVVKNTSTLS MNDAQLYKKA RRSAISLTYY GFCLMDGPYN VILHFAEIMF TGDKSYQSLG 300 KRDFNIYIQG KLVWKDFNIE IEAGGVGKEV MRNFTADVTK GTLEIRFYWA GKGSTGIPED 360 GVYGPLISAI SVYSDLKYLA LQIGLFTLRQ IKAATNNFDP ANKIGEGGFG SVYKNYKRNY 420 RHFQNKSNDV PIIVAKIRKL VTRRASLYKN FSPSQINLIL GTIWRFPHSI FARS* 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN00113 | PLN00113 | 1.0e-12 | 2 | 142 | 146 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
PLN00113 | PLN00113 | 7.0e-13 | 1 | 144 | 150 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
PLN00113 | PLN00113 | 6.0e-15 | 2 | 190 | 194 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
PLN00113 | PLN00113 | 6.0e-15 | 2 | 142 | 146 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
pfam11721 | Malectin | 2.0e-53 | 187 | 370 | 187 | + Di-glucose binding within endoplasmic reticulum. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan. |
Gene Ontology | |
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GO Term | Description |
GO:0005515 | protein binding |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI20124.1 | 0 | 2 | 414 | 246 | 706 | unnamed protein product [Vitis vinifera] |
EMBL | CBI20124.1 | 0.00008 | 14 | 141 | 162 | 290 | unnamed protein product [Vitis vinifera] |
EMBL | CBI20124.1 | 0.0001 | 19 | 144 | 120 | 247 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002283596.1 | 0 | 2 | 414 | 246 | 706 | PREDICTED: hypothetical protein [Vitis vinifera] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3rj0_A | 0.00000000000001 | 2 | 124 | 405 | 528 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
PDB | 3rj0_A | 0.0005 | 70 | 125 | 664 | 719 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
CB892260 | 257 | 125 | 376 | 0 |
FC916246 | 223 | 2 | 219 | 0 |
DY283633 | 223 | 2 | 219 | 0 |
FC916246 | 117 | 26 | 141 | 0.0005 |
DY283633 | 117 | 26 | 141 | 0.0006 |
Sequence Alignments (This image is cropped. Click for full image.) |
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