Basic Information | |
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Species | Eucalyptus grandis |
Cazyme ID | Eucgr.K01777.2 |
Family | CBM57 |
Protein Properties | Length: 358 Molecular Weight: 40292 Isoelectric Point: 9.5866 |
Chromosome | Chromosome/Scaffold: 11 Start: 22024954 End: 22029936 |
Description | Leucine-rich repeat transmembrane protein kinase |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM57 | 74 | 252 | 8.2e-30 |
INCGGSKAKVKGTTYEADSEEATPSSFFRSDYWAYSSTGYFTDYCSTAFSYVVKNTSTLSMNDAQLYKKARRSAISLTYYGFCLMDGPYNVILHFAEIMF TGDKSYQSLGKRDFNIYIQGKLVWKDFNIEIEAGGVGKEVMRNFTADVTKGTLEIRFYWAGKGSTGIPEDGVYGPLISA |
Full Sequence |
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Protein Sequence Length: 358 Download |
MRMFAINFST RDLDFQGPAF LLFMCLASNF IKNDDDYNSK IFADLLRTSC SATSGLVSCL 60 QSQRCAKTQY NLFINCGGSK AKVKGTTYEA DSEEATPSSF FRSDYWAYSS TGYFTDYCST 120 AFSYVVKNTS TLSMNDAQLY KKARRSAISL TYYGFCLMDG PYNVILHFAE IMFTGDKSYQ 180 SLGKRDFNIY IQGKLVWKDF NIEIEAGGVG KEVMRNFTAD VTKGTLEIRF YWAGKGSTGI 240 PEDGVYGPLI SAISVYSDLK YLALQIGLFT LRQIKAATNN FDPANKIGEG GFGSVYKNYK 300 RNYRHFQNKS NDVPIIVAKI RKLVTRRASL YKNFSPSQIN LILGTIWRFP HSIFARS* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03150 | PLN03150 | 2.0e-5 | 162 | 256 | 95 | + hypothetical protein; Provisional | ||
pfam12819 | Malectin_like | 3.0e-7 | 74 | 257 | 189 | + Carbohydrate-binding protein of the ER. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. The domain is found on a number of plant receptor kinases. | ||
pfam11721 | Malectin | 2.0e-53 | 70 | 253 | 187 | + Di-glucose binding within endoplasmic reticulum. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN74151.1 | 0 | 55 | 297 | 258 | 552 | hypothetical protein [Vitis vinifera] |
EMBL | CBI20121.1 | 0 | 56 | 297 | 384 | 677 | unnamed protein product [Vitis vinifera] |
EMBL | CBI20124.1 | 0 | 55 | 297 | 412 | 706 | unnamed protein product [Vitis vinifera] |
EMBL | CBI20136.1 | 0 | 56 | 297 | 88 | 379 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002283596.1 | 0 | 55 | 297 | 412 | 706 | PREDICTED: hypothetical protein [Vitis vinifera] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2oid_D | 0.005 | 269 | 302 | 9 | 48 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
PDB | 2oid_C | 0.005 | 269 | 302 | 9 | 48 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
PDB | 2oid_B | 0.005 | 269 | 302 | 9 | 48 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
PDB | 2oid_A | 0.005 | 269 | 302 | 9 | 48 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
PDB | 2oic_D | 0.005 | 269 | 302 | 9 | 48 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
CB892260 | 206 | 55 | 258 | 0 |
ES818477 | 270 | 78 | 296 | 0 |
JG214646 | 269 | 86 | 297 | 0 |
JG218180 | 268 | 86 | 296 | 0 |
FE709838 | 204 | 54 | 255 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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