| Basic Information | |
|---|---|
| Species | Eucalyptus grandis |
| Cazyme ID | Eucgr.K02113.2 |
| Family | CBM43 |
| Protein Properties | Length: 467 Molecular Weight: 51502.1 Isoelectric Point: 9.4988 |
| Chromosome | Chromosome/Scaffold: 11 Start: 28226246 End: 28229432 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CBM43 | 377 | 460 | 3e-27 |
| WCVVAKRANRSALASALSYACSQGNATCGPIQPGKACHRKGSLVRQASYAFSSYWAQFRKTGGSCYFNGLATQTIEDPSYGSCE | |||
| GH17 | 27 | 350 | 0 |
| IGVNYGQLGNNLPSPTRSVWLIKHQLKAQRVKIYDANPSILRALEHTGIQVSVMVPNELINAIAVNQTLADSWVGSNVVPFHPATKIRYLLVGNEILSSA DNTTWFNLVPAMRKVKKALKRHKVHHKVKVGTPLAMDVLATSYPPSSGSFRPDVSDRVMKPMLQFLNRTKSFFFIDVYPYFAWSSDPKTIDLNYALFESK NVTVKDPGTGLVYTNLFDQMVDAVTFAMKKLGYPNIPIWIAETGWPNAGDYDQIGANIYNAATYNRNVVKKLSARPAIGTPARPGWVLPSFMFALYNENQ KTGPGTERHFGLLYPNDSFVYDID | |||
| Full Sequence |
|---|
| Protein Sequence Length: 467 Download |
| MQMGLLHLLV FSSLLLALCS AEILSKIGVN YGQLGNNLPS PTRSVWLIKH QLKAQRVKIY 60 DANPSILRAL EHTGIQVSVM VPNELINAIA VNQTLADSWV GSNVVPFHPA TKIRYLLVGN 120 EILSSADNTT WFNLVPAMRK VKKALKRHKV HHKVKVGTPL AMDVLATSYP PSSGSFRPDV 180 SDRVMKPMLQ FLNRTKSFFF IDVYPYFAWS SDPKTIDLNY ALFESKNVTV KDPGTGLVYT 240 NLFDQMVDAV TFAMKKLGYP NIPIWIAETG WPNAGDYDQI GANIYNAATY NRNVVKKLSA 300 RPAIGTPARP GWVLPSFMFA LYNENQKTGP GTERHFGLLY PNDSFVYDID LSGETPDTEY 360 GKLPAPTNNE PYEGKIWCVV AKRANRSALA SALSYACSQG NATCGPIQPG KACHRKGSLV 420 RQASYAFSSY WAQFRKTGGS CYFNGLATQT IEDPSYGSCE FPAVTL* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 0.001 | 261 | 343 | 86 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 3.0e-10 | 377 | 448 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 1.0e-22 | 377 | 461 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 6.0e-107 | 27 | 350 | 324 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAM65039.1 | 0 | 16 | 466 | 14 | 460 | putative glucan endo-1-3-beta-glucosidase [Arabidopsis thaliana] |
| EMBL | CBI39470.1 | 0 | 13 | 466 | 15 | 467 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_683538.1 | 0 | 16 | 466 | 14 | 460 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
| RefSeq | XP_002303070.1 | 0 | 9 | 466 | 5 | 461 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002334812.1 | 0 | 3 | 466 | 2 | 465 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2cyg_A | 0 | 27 | 351 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 1ghs_B | 0 | 27 | 351 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 1ghs_A | 0 | 27 | 351 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 3f55_D | 0 | 26 | 352 | 1 | 316 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 3f55_C | 0 | 26 | 352 | 1 | 316 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
