Basic Information | |
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Species | Eucalyptus grandis |
Cazyme ID | Eucgr.K02191.1 |
Family | GT47 |
Protein Properties | Length: 420 Molecular Weight: 47541.9 Isoelectric Point: 7.0774 |
Chromosome | Chromosome/Scaffold: 11 Start: 29163412 End: 29166305 |
Description | Exostosin family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 52 | 347 | 0 |
RLKVFVYELPSKYNKKILQKDPRCLNHMFAAEIYMHRFLLSSPVRTLNPEEADWFYTPVYTTCDLTPNGLPLPFKSPRMMRSAIQLISSNWPYWNRTEGA DHFFLVPHDFGACFHYQEEKAIERGILTLLQRATLVQTFGQRYHVCLKDGSITIPPYAPPQKMQAHLIPEKTPRSIFVYFRGLFYDVGNDPEGGYYARGA RAAVWENFKDNPLFDISTEHPSTYYEDMQRAVFCLCPLGWAPWSPRLVEAVIFGCIPVIIADDIVLPFADAIPWEEIGVFVDEKDVPNLDTILTSI |
Full Sequence |
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Protein Sequence Length: 420 Download |
MKMWAFFFIG LLCVHLSPVS ARIGASDSGR TQPTERISGS AGDVLEDDPV GRLKVFVYEL 60 PSKYNKKILQ KDPRCLNHMF AAEIYMHRFL LSSPVRTLNP EEADWFYTPV YTTCDLTPNG 120 LPLPFKSPRM MRSAIQLISS NWPYWNRTEG ADHFFLVPHD FGACFHYQEE KAIERGILTL 180 LQRATLVQTF GQRYHVCLKD GSITIPPYAP PQKMQAHLIP EKTPRSIFVY FRGLFYDVGN 240 DPEGGYYARG ARAAVWENFK DNPLFDISTE HPSTYYEDMQ RAVFCLCPLG WAPWSPRLVE 300 AVIFGCIPVI IADDIVLPFA DAIPWEEIGV FVDEKDVPNL DTILTSIPPE VILRKQRLLA 360 NPSMKQAMLF PQPAQPGDAF HQVLNGLARK LPHGRSVYLK PGEKILNWTA GPVGDLKPW* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 7.0e-83 | 52 | 347 | 304 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAM64940.1 | 0 | 1 | 419 | 1 | 415 | unknown [Arabidopsis thaliana] |
RefSeq | NP_568941.1 | 0 | 1 | 419 | 1 | 415 | GUT1; catalytic/ glucuronoxylan glucuronosyltransferase [Arabidopsis thaliana] |
RefSeq | XP_002284685.1 | 0 | 11 | 419 | 7 | 416 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002318180.1 | 0 | 1 | 419 | 1 | 417 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002511079.1 | 0 | 1 | 419 | 1 | 417 | catalytic, putative [Ricinus communis] |