Basic Information | |
---|---|
Species | Eucalyptus grandis |
Cazyme ID | Eucgr.L00258.1 |
Family | CE8 |
Protein Properties | Length: 300 Molecular Weight: 33326.8 Isoelectric Point: 5.1792 |
Chromosome | Chromosome/Scaffold: 17 Start: 373529 End: 374994 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
CE8 | 44 | 285 | 0 |
ELVTIPLEKPCIFLQGKGRHLTTIVFDSHQQTDTSATFTSNPDNIVVQAITFETDEPPIVQALAARVYGDKCVFLQCGFLGVQDTVWDVQGRHLYDSCYI EGAVDFIFGGGQSFFQDCNMNVTVGLPPYNLPDGFVTAQGRESPDDRSGFFFERGAVFGVGKFLLGRAYRRYSTVVFHKTKLAAGVAPEGWDAWTYKGHE DFITYAEVDCEGRGSDTSKRVPWERHLTPEQMRYFSRKNFID |
Full Sequence |
---|
Protein Sequence Length: 300 Download |
MDKKMRLLIT APLPATLFCI LLTTSRAADC TAGNEGDAIT VDLELVTIPL EKPCIFLQGK 60 GRHLTTIVFD SHQQTDTSAT FTSNPDNIVV QAITFETDEP PIVQALAARV YGDKCVFLQC 120 GFLGVQDTVW DVQGRHLYDS CYIEGAVDFI FGGGQSFFQD CNMNVTVGLP PYNLPDGFVT 180 AQGRESPDDR SGFFFERGAV FGVGKFLLGR AYRRYSTVVF HKTKLAAGVA PEGWDAWTYK 240 GHEDFITYAE VDCEGRGSDT SKRVPWERHL TPEQMRYFSR KNFIDQEGWL GKTPVAKML* 300 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02682 | PLN02682 | 5.0e-54 | 44 | 290 | 263 | + pectinesterase family protein | ||
PLN02304 | PLN02304 | 5.0e-56 | 44 | 290 | 263 | + probable pectinesterase | ||
PLN02480 | PLN02480 | 3.0e-70 | 44 | 290 | 260 | + Probable pectinesterase | ||
PLN02497 | PLN02497 | 2.0e-91 | 44 | 295 | 260 | + probable pectinesterase | ||
PLN02176 | PLN02176 | 2.0e-91 | 44 | 295 | 259 | + putative pectinesterase |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002318946.1 | 0 | 43 | 295 | 77 | 339 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002330032.1 | 0 | 26 | 295 | 54 | 324 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002515259.1 | 0 | 44 | 294 | 77 | 339 | pectinesterase, putative [Ricinus communis] |
RefSeq | XP_002529267.1 | 0 | 41 | 299 | 76 | 342 | Pectinesterase-2 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 1e-26 | 44 | 293 | 48 | 311 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 8e-24 | 44 | 296 | 44 | 310 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 0.0000001 | 96 | 163 | 119 | 190 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 0.0000001 | 96 | 163 | 119 | 190 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 0.0000001 | 96 | 163 | 119 | 190 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |