Basic Information | |
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Species | Eucalyptus grandis |
Cazyme ID | Eucgr.L00260.1 |
Family | CE8 |
Protein Properties | Length: 345 Molecular Weight: 38649.3 Isoelectric Point: 6.3011 |
Chromosome | Chromosome/Scaffold: 17 Start: 395505 End: 397412 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 39 | 328 | 0 |
ITVDQHGSGHFTSVQVAINSVPSGNNKWISIRINPGTYKEMVTIPPDKPCIFLQGKGRDSTIITYNSHEQTDTSATFTSSPDNIVVQGITFKNSYNRYWK ESNEPPLVQALAARVYGDKCVFFECGFLGLQDTLWDVQGRHYYGSCYIEGAIDFIFGSGQSIFEDCTMNVTATLPPYRLQYSCITAQGRASPGDPSGFVF ERGAVIGSGPYLLGRAYGPYSRVVFHKTLLSAGVAPQGWDPWHCQGREDNIMYAEVDCEGTGSDTSQRVQWEKHLDKTQLQYFSRSYFLD |
Full Sequence |
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Protein Sequence Length: 345 Download |
MKSAWHSETM NFFFGKKKML YCDFKLNCNI MDTNYGNTIT VDQHGSGHFT SVQVAINSVP 60 SGNNKWISIR INPGTYKEMV TIPPDKPCIF LQGKGRDSTI ITYNSHEQTD TSATFTSSPD 120 NIVVQGITFK NSYNRYWKES NEPPLVQALA ARVYGDKCVF FECGFLGLQD TLWDVQGRHY 180 YGSCYIEGAI DFIFGSGQSI FEDCTMNVTA TLPPYRLQYS CITAQGRASP GDPSGFVFER 240 GAVIGSGPYL LGRAYGPYSR VVFHKTLLSA GVAPQGWDPW HCQGREDNIM YAEVDCEGTG 300 SDTSQRVQWE KHLDKTQLQY FSRSYFLDQE GWLANTPLGK TFES* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02682 | PLN02682 | 8.0e-79 | 38 | 335 | 312 | + pectinesterase family protein | ||
PLN02432 | PLN02432 | 1.0e-80 | 39 | 333 | 295 | + putative pectinesterase | ||
PLN02480 | PLN02480 | 1.0e-90 | 38 | 333 | 301 | + Probable pectinesterase | ||
PLN02497 | PLN02497 | 2.0e-111 | 35 | 338 | 305 | + probable pectinesterase | ||
PLN02176 | PLN02176 | 7.0e-112 | 38 | 338 | 301 | + putative pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002277623.1 | 0 | 36 | 337 | 40 | 337 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002318946.1 | 0 | 38 | 338 | 38 | 339 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002330032.1 | 0 | 38 | 338 | 38 | 324 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002515259.1 | 0 | 26 | 337 | 25 | 339 | pectinesterase, putative [Ricinus communis] |
RefSeq | XP_002529267.1 | 0 | 28 | 337 | 29 | 337 | Pectinesterase-2 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 1.99965e-42 | 36 | 336 | 6 | 311 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 2e-33 | 40 | 336 | 6 | 307 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 0.000000000000006 | 33 | 206 | 2 | 190 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 0.000000000000006 | 33 | 206 | 2 | 190 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 0.000000000000006 | 33 | 206 | 2 | 190 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DV984237 | 292 | 49 | 333 | 0 |
EX315894 | 278 | 63 | 333 | 0 |
EX317112 | 277 | 64 | 333 | 0 |
GR458872 | 290 | 42 | 328 | 0 |
FC372426 | 296 | 48 | 335 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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