Basic Information | |
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Species | Eucalyptus grandis |
Cazyme ID | Eucgr.L02165.1 |
Family | GT47 |
Protein Properties | Length: 399 Molecular Weight: 45801.6 Isoelectric Point: 10.0565 |
Chromosome | Chromosome/Scaffold: 647 Start: 37752 End: 40860 |
Description | Exostosin family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 66 | 349 | 0 |
EKRFKVWSYKEGDQPLFHKGPMNDIYSIEGHFIDELEGGRSPFSARRPDEALAFFIPVSIVNIIEFVYRPYTTYARDQLQAIVEDYIGLVSRRHPHWNRT GGADHFMISCHDWAPEVSNGHPQLFKHFIRVLCNANSSEGFRPSRDVSLPEIFLPRGKLLSPRPAPPPDNRLVLAFFAGGAHGPVRKELLRHWKDKDDQV RVHGYLSKTLNYTELMGRSKFCLCPSGYEVASPRVVESIYAGCVPVIISDGYVLPFSDVLDWSKFSVHIPVSRIPDIKRILEGV |
Full Sequence |
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Protein Sequence Length: 399 Download |
QKRARVAVDR REESLARARA AIRRASGGKT TTVVNSTSHY QEDRFVPSGP VYRNPRAFHQ 60 SHIEMEKRFK VWSYKEGDQP LFHKGPMNDI YSIEGHFIDE LEGGRSPFSA RRPDEALAFF 120 IPVSIVNIIE FVYRPYTTYA RDQLQAIVED YIGLVSRRHP HWNRTGGADH FMISCHDWAP 180 EVSNGHPQLF KHFIRVLCNA NSSEGFRPSR DVSLPEIFLP RGKLLSPRPA PPPDNRLVLA 240 FFAGGAHGPV RKELLRHWKD KDDQVRVHGY LSKTLNYTEL MGRSKFCLCP SGYEVASPRV 300 VESIYAGCVP VIISDGYVLP FSDVLDWSKF SVHIPVSRIP DIKRILEGVP AEEYRKKQRR 360 VVEVQRHFVV NRPAKPYDMM HMAMHSVWLR RLNLKLPL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 1.0e-66 | 65 | 349 | 303 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI21065.1 | 0 | 1 | 398 | 8 | 402 | unnamed protein product [Vitis vinifera] |
Swiss-Prot | Q9LFP3 | 0 | 10 | 398 | 91 | 478 | GLYT4_ARATH RecName: Full=Probable glycosyltransferase At5g11130 |
RefSeq | XP_002285239.1 | 0 | 65 | 398 | 1 | 337 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002324873.1 | 0 | 65 | 397 | 1 | 334 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002515488.1 | 0 | 8 | 396 | 86 | 468 | catalytic, putative [Ricinus communis] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EC939466 | 262 | 41 | 297 | 0 |
FD507587 | 228 | 108 | 335 | 0 |
CV880634 | 200 | 150 | 349 | 0 |
FE523338 | 297 | 43 | 338 | 0 |
GO373511 | 255 | 142 | 396 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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