| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G000959_T01 |
| Family | CBM43 |
| Protein Properties | Length: 473 Molecular Weight: 50504.5 Isoelectric Point: 6.2808 |
| Chromosome | Chromosome/Scaffold: 2 Start: 133189502 End: 133191105 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CBM43 | 378 | 465 | 2.4e-22 |
| WCVVRTAGINETAVREQVAAVCDDDEAEDALCDPVRPGGACFLPNTVAAHASYVFSAHWNRFSEDYGACYFDGWGMETTIDPSHGSCK | |||
| GH17 | 29 | 351 | 0 |
| LGVNYGTLGDNLPPPHRGMELARSAGAVSVRFYDANATLLAAAAASGLDFVPSFPNELIPSLAGSQRAADALVAATLLPFRGNPRLRYLFVGNEFLSNPT AKPNWALIVPAMTNAARALRRHGLAHVKVSTTLSMNDLGNTVLPPSAGAFRPEIAEAVMGPMLAFLQRTGSCLFLDAYTYFTWSANHTIFPLPYALLEPS PGFAYHDPGTGLSYANLLDQMLDTAAAAMCRLGYCGVGLALAETGWPTAGDLDQFGANVRNAATYNRNLARRLASGAGTPRRPGVPVPAMVFALFNEDLK WGPDTERHWGLFYPNGSAVYEVD | |||
| Full Sequence |
|---|
| Protein Sequence Length: 473 Download |
| MAVSQLHLVV MVILVSAVAS APAVAAQYLG VNYGTLGDNL PPPHRGMELA RSAGAVSVRF 60 YDANATLLAA AAASGLDFVP SFPNELIPSL AGSQRAADAL VAATLLPFRG NPRLRYLFVG 120 NEFLSNPTAK PNWALIVPAM TNAARALRRH GLAHVKVSTT LSMNDLGNTV LPPSAGAFRP 180 EIAEAVMGPM LAFLQRTGSC LFLDAYTYFT WSANHTIFPL PYALLEPSPG FAYHDPGTGL 240 SYANLLDQML DTAAAAMCRL GYCGVGLALA ETGWPTAGDL DQFGANVRNA ATYNRNLARR 300 LASGAGTPRR PGVPVPAMVF ALFNEDLKWG PDTERHWGLF YPNGSAVYEV DLTGRRPLAS 360 YPPLPPATND QPYRGPLWCV VRTAGINETA VREQVAAVCD DDEAEDALCD PVRPGGACFL 420 PNTVAAHASY VFSAHWNRFS EDYGACYFDG WGMETTIDPS HGSCKFPSIH LK* 480 |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 0.001 | 269 | 343 | 82 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 2.0e-5 | 377 | 453 | 82 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 2.0e-23 | 377 | 466 | 90 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 1.0e-74 | 29 | 351 | 324 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EEC76519.1 | 0 | 1 | 469 | 1 | 471 | hypothetical protein OsI_14305 [Oryza sativa Indica Group] |
| GenBank | EEC84834.1 | 0 | 2 | 468 | 3 | 474 | hypothetical protein OsI_31928 [Oryza sativa Indica Group] |
| RefSeq | NP_001051879.1 | 0 | 1 | 469 | 1 | 471 | Os03g0845600 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001063586.1 | 0 | 25 | 468 | 30 | 477 | Os09g0502200 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002463526.1 | 0 | 6 | 472 | 5 | 483 | hypothetical protein SORBIDRAFT_01g001430 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2cyg_A | 0 | 29 | 352 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_D | 0 | 29 | 353 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_C | 0 | 29 | 353 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_B | 0 | 29 | 353 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_A | 0 | 29 | 353 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
