| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G001288_T03 |
| Family | CBM43 |
| Protein Properties | Length: 380 Molecular Weight: 37661.9 Isoelectric Point: 4.9688 |
| Chromosome | Chromosome/Scaffold: 1 Start: 64718043 End: 64720688 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH17 | 1 | 115 | 2.2e-21 |
| MLTVPNEQLEHVAEFQEEADLWVAASVARFVPATRITHVLAGDDAPARSPPSAHFLVPAMANLRSALAAAGLAGRVSVSSALSAETLAAPDPDWSGVVGR VLRSLASAGSPLVLK | |||
| CBM43 | 186 | 267 | 8.3e-30 |
| CVALQNADPAALQAGLSWACGPGHADCSAIQPGGACYQQNNLPALASYAYNDYYQRMASTGATCSFNGTATTTTNDPSSGSC | |||
| Full Sequence |
|---|
| Protein Sequence Length: 380 Download |
| MLTVPNEQLE HVAEFQEEAD LWVAASVARF VPATRITHVL AGDDAPARSP PSAHFLVPAM 60 ANLRSALAAA GLAGRVSVSS ALSAETLAAP DPDWSGVVGR VLRSLASAGS PLVLKSSGPS 120 EASDARADAA YAAMRALGVS GVPVIAADLA AAAADVVPYY YYGYGYADGH SHPGVQRRSL 180 ATGTFCVALQ NADPAALQAG LSWACGPGHA DCSAIQPGGA CYQQNNLPAL ASYAYNDYYQ 240 RMASTGATCS FNGTATTTTN DPSSGSCVFA GSSNSSVPVG ASPPTSLSPP TGFTPPVGSS 300 PPSSSEFGPP AAGTTPPAGG GLGPGFGTPP GSFNGTGSFG PSGTLNPYNG VSRGLPRAGL 360 FTALSAAAVA VLLVSVDAM* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00332 | Glyco_hydro_17 | 2.0e-5 | 1 | 112 | 120 | + Glycosyl hydrolases family 17. | ||
| pfam07983 | X8 | 1.0e-18 | 184 | 256 | 82 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 6.0e-36 | 184 | 269 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EEC75349.1 | 0 | 1 | 271 | 76 | 352 | hypothetical protein OsI_11774 [Oryza sativa Indica Group] |
| RefSeq | NP_001050214.1 | 0 | 1 | 346 | 76 | 433 | Os03g0374600 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001150091.1 | 0 | 170 | 299 | 46 | 176 | LOC100283720 [Zea mays] |
| RefSeq | XP_002463238.1 | 0 | 168 | 299 | 40 | 172 | hypothetical protein SORBIDRAFT_02g040340 [Sorghum bicolor] |
| RefSeq | XP_002467792.1 | 0 | 1 | 360 | 44 | 409 | hypothetical protein SORBIDRAFT_01g034190 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2jon_A | 0.0000000000003 | 181 | 274 | 9 | 101 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
| PDB | 3ur8_B | 0.0000009 | 1 | 148 | 53 | 236 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
| PDB | 3ur8_A | 0.0000009 | 1 | 148 | 53 | 236 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
| PDB | 3ur7_B | 0.0000009 | 1 | 148 | 53 | 236 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| PDB | 3ur7_A | 0.0000009 | 1 | 148 | 53 | 236 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
