| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G001820_T01 |
| Family | GH33 |
| Protein Properties | Length: 361 Molecular Weight: 40319.1 Isoelectric Point: 5.4792 |
| Chromosome | Chromosome/Scaffold: 2 Start: 203135392 End: 203142289 |
| Description | BNR/Asp-box repeat family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH33 | 93 | 353 | 4.6e-25 |
| APFNSCHASTIVQIEEDNFLVAYFGGSREGAPDVKIWLQRYSDGHWHPPVVADEQDGVPMWNPVLFQLPSRELLLFYKIGQEVQKWSGAMKRSLDGGVTW SPREQLPPGILGPIKNKPFLLEDGRLLCGSSVESWNSWGAWLEVTKDAGWTWRKYGPICIKGQPLGVIQPVPYRTDDGTIRVLLRSFETIGHVCMADSID EGVTWSYVRETELPNPNSGIDGVKMKDGRVLLAYNTFSRGTLKLAVSLNDGDSWDEVMTLE | |||
| Full Sequence |
|---|
| Protein Sequence Length: 361 Download |
| MRLQYAWNAI PFILLFCAIS TNKIFSNNKP FSFTIASARS LLQIDPNSGL VQDKVKVGQI 60 LEEDTQNIVN MTMNVSSGWS IVKEELILPA RGAPFNSCHA STIVQIEEDN FLVAYFGGSR 120 EGAPDVKIWL QRYSDGHWHP PVVADEQDGV PMWNPVLFQL PSRELLLFYK IGQEVQKWSG 180 AMKRSLDGGV TWSPREQLPP GILGPIKNKP FLLEDGRLLC GSSVESWNSW GAWLEVTKDA 240 GWTWRKYGPI CIKGQPLGVI QPVPYRTDDG TIRVLLRSFE TIGHVCMADS IDEGVTWSYV 300 RETELPNPNS GIDGVKMKDG RVLLAYNTFS RGTLKLAVSL NDGDSWDEVM TLEDTKGRRL 360 * |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd00260 | Sialidase | 0.0004 | 116 | 349 | 274 | + Sialidases or neuraminidases function to bind and hydrolyze terminal sialic acid residues from various glycoconjugates as well as playing roles in pathogenesis, bacterial nutrition and cellular interactions. They have a six-bladed, beta-propeller fold with the non-viral sialidases containing 2-5 Asp-box motifs (most commonly Ser/Thr-X-Asp-[X]-Gly-X-Thr- Trp/Phe). This CD includes eubacterial, eukaryotic, and viral sialidases. | ||
| COG4692 | COG4692 | 5.0e-20 | 63 | 353 | 343 | + Predicted neuraminidase (sialidase) [Carbohydrate transport and metabolism] | ||
| pfam13088 | BNR_2 | 1.0e-83 | 109 | 357 | 264 | + BNR repeat-like domain. This family of proteins contains BNR-like repeats suggesting these proteins may act as sialidases. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EEC82140.1 | 0 | 2 | 357 | 9 | 384 | hypothetical protein OsI_26191 [Oryza sativa Indica Group] |
| GenBank | EEC82140.1 | 0 | 105 | 357 | 421 | 647 | hypothetical protein OsI_26191 [Oryza sativa Indica Group] |
| RefSeq | NP_001059779.1 | 0 | 2 | 357 | 9 | 384 | Os07g0516000 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001159249.1 | 0 | 1 | 360 | 1 | 360 | hypothetical protein LOC100304339 [Zea mays] |
| RefSeq | XP_002460769.1 | 0 | 2 | 357 | 8 | 372 | hypothetical protein SORBIDRAFT_02g034675 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2jkb_A | 0.0006 | 181 | 316 | 449 | 574 | A Chain A, Crystal Structure Of Streptococcus Pneumoniae Nanb In Complex With 2,7-Anhydro-Neu5ac |
| PDB | 4fq4_A | 0.0006 | 181 | 316 | 460 | 585 | A Chain A, Crystal Structure Of Streptococcus Pneumoniae Nanb In Complex With 2,7-Anhydro-Neu5ac |
| PDB | 4fpy_A | 0.0006 | 181 | 316 | 460 | 585 | A Chain A, Crystal Structure Of Streptococcus Pneumoniae Nanb In Complex With 2,7-Anhydro-Neu5ac |
| PDB | 4fpo_B | 0.0006 | 181 | 316 | 460 | 585 | A Chain A, Crystal Structure Of Streptococcus Pneumoniae Nanb In Complex With 2,7-Anhydro-Neu5ac |
| PDB | 4fpl_A | 0.0006 | 181 | 316 | 460 | 585 | A Chain A, Crystal Structure Of Streptococcus Pneumoniae Nanb In Complex With 2,7-Anhydro-Neu5ac |
