| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G002260_T01 |
| Family | CBM22 |
| Protein Properties | Length: 749 Molecular Weight: 82008.5 Isoelectric Point: 5.1703 |
| Chromosome | Chromosome/Scaffold: 5 Start: 13969386 End: 13972322 |
| Description | glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CBM22 | 19 | 161 | 1.9e-30 |
| NIILNPEFDDGLDSWAGSGCKIELHDSLDDGKVLPANGKYFVAATGRTDTWNGVQQDVTARMQRKLLYEATATVRLHSAAGGGGGAVAPCEVRATLGVQT ADGRQQYLSVGKSQVSDKEWVQLQGKILLNSTVAKASIYIEGP | |||
| CBM22 | 196 | 340 | 3.5e-38 |
| NIMQNSNLDDGLNGWFPLGPCTLSVHDGGPRVLPPMAQESLELDDEPLNGKHIHVTNRSQTWMGPAQIITDKLTLYATYQVSAWVRVGAHASGAPQTINV AFAVDSQWINGGQVLARDERWYEVGGALRVEAKPATRVMVYVQGP | |||
| GH10 | 405 | 688 | 0 |
| VSNSFPLGACIMRTNMDNEDFVDFFTKNFNWAVFGNELKWYWTEPQRGQFNYSDADDLLRLCSDHGMCVRGHCIFWEVDNAVQQWVKTLSTDDLSAAVSN RINGLLTRYKGKFKHYDVNNEMLHGSFYQDKLGKDIRATMFKTASELDPDALLFVNDYNVESMCDIHATPEAYIQQIMGLQEQGAPVGGVGLQGHVSNPV GPVIRSMLDRLAVLGLPLWFTELDVSSANEHVRADDLEVMLREAYAHPAVEGVMLWGFWELFMSRDDAHLVDAEGQVNEAGRRL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 749 Download |
| MAIGGDAGLL VGDGAGDDNI ILNPEFDDGL DSWAGSGCKI ELHDSLDDGK VLPANGKYFV 60 AATGRTDTWN GVQQDVTARM QRKLLYEATA TVRLHSAAGG GGGAVAPCEV RATLGVQTAD 120 GRQQYLSVGK SQVSDKEWVQ LQGKILLNST VAKASIYIEG PPAGVDVLLD SLVVKHAQKA 180 PPAPAPDFEN LEYGANIMQN SNLDDGLNGW FPLGPCTLSV HDGGPRVLPP MAQESLELDD 240 EPLNGKHIHV TNRSQTWMGP AQIITDKLTL YATYQVSAWV RVGAHASGAP QTINVAFAVD 300 SQWINGGQVL ARDERWYEVG GALRVEAKPA TRVMVYVQGP DAGVDLMVAG LQVFPVDRKA 360 RVKHLKRLTD KVRKRDVVLK VTGADGAAAG AVKEADGVEV RVRQVSNSFP LGACIMRTNM 420 DNEDFVDFFT KNFNWAVFGN ELKWYWTEPQ RGQFNYSDAD DLLRLCSDHG MCVRGHCIFW 480 EVDNAVQQWV KTLSTDDLSA AVSNRINGLL TRYKGKFKHY DVNNEMLHGS FYQDKLGKDI 540 RATMFKTASE LDPDALLFVN DYNVESMCDI HATPEAYIQQ IMGLQEQGAP VGGVGLQGHV 600 SNPVGPVIRS MLDRLAVLGL PLWFTELDVS SANEHVRADD LEVMLREAYA HPAVEGVMLW 660 GFWELFMSRD DAHLVDAEGQ VNEAGRRLLQ LKREWLTHSH GHADENGEYK FRGHHGEYHV 720 DVTTPTGKVS QTFTVDKDDA PLVLNIKV* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02018 | CBM_4_9 | 3.0e-11 | 195 | 342 | 155 | + Carbohydrate binding domain. This family includes diverse carbohydrate binding domains. | ||
| pfam02018 | CBM_4_9 | 3.0e-18 | 19 | 163 | 146 | + Carbohydrate binding domain. This family includes diverse carbohydrate binding domains. | ||
| COG3693 | XynA | 1.0e-34 | 440 | 662 | 243 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
| pfam00331 | Glyco_hydro_10 | 2.0e-81 | 406 | 692 | 307 | + Glycosyl hydrolase family 10. | ||
| smart00633 | Glyco_10 | 3.0e-84 | 442 | 688 | 268 | + Glycosyl hydrolase family 10. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| GO:0016798 | hydrolase activity, acting on glycosyl bonds |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EAY91350.1 | 0 | 1 | 748 | 1 | 756 | hypothetical protein OsI_12971 [Oryza sativa Indica Group] |
| RefSeq | NP_001050876.1 | 0 | 1 | 748 | 1 | 756 | Os03g0672900 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002283550.1 | 0 | 15 | 746 | 263 | 979 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002283550.1 | 2e-30 | 19 | 353 | 94 | 416 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002466685.1 | 0 | 2 | 748 | 3 | 748 | hypothetical protein SORBIDRAFT_01g012210 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1xyz_B | 1e-34 | 411 | 662 | 39 | 307 | A Chain A, A Common Protein Fold And Similar Active Site In Two Distinct Families Of Beta-Glycanases |
| PDB | 1xyz_A | 1e-34 | 411 | 662 | 39 | 307 | A Chain A, A Common Protein Fold And Similar Active Site In Two Distinct Families Of Beta-Glycanases |
| PDB | 1nq6_A | 2e-30 | 411 | 669 | 15 | 277 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
| PDB | 1e0v_A | 6e-30 | 411 | 661 | 16 | 267 | A Chain A, Xylanase 10a From Sreptomyces Lividans. Cellobiosyl-Enzyme Intermediate At 1.7 A |
| PDB | 1v0n_A | 6e-30 | 411 | 661 | 16 | 267 | A Chain A, Xylanase 10a From Sreptomyces Lividans. Cellobiosyl-Enzyme Intermediate At 1.7 A |
| Hydropathy |
|---|
 |
