| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G003794_T02 |
| Family | GH10 |
| Protein Properties | Length: 408 Molecular Weight: 45538.9 Isoelectric Point: 5.2925 |
| Chromosome | Chromosome/Scaffold: 3 Start: 20745487 End: 20747924 |
| Description | glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH10 | 47 | 329 | 0 |
| VMQMDSSFPFGTCINTNVIQNPGFVDFFAKHFDWAVFENELKWYHTEAQQGQLNYSDSDALLDFCDRYGKPVRGHCIFWAVANTVQQWVKNLDDDQLASA VRARLQSLLTRYAGRFPHYDVNNEMLHGSYYQDRLGDDINAFMFREAARLDPGATLFVNDYNVEGGSDPNATPEKYIEQISALQQKGAAVGGIGLQGHVT NPVGEIICDALDKLATTDLPVWLTELDVSESDVDLRAEDLEVVLREAYAHPAVEGVIFWGCMQGHMWRQDACLIDADGNVNDA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 408 Download |
| MDLQVFATDR RARFRKLRKK TDKVRKRDVV LNFGSAASGI SGASIRVMQM DSSFPFGTCI 60 NTNVIQNPGF VDFFAKHFDW AVFENELKWY HTEAQQGQLN YSDSDALLDF CDRYGKPVRG 120 HCIFWAVANT VQQWVKNLDD DQLASAVRAR LQSLLTRYAG RFPHYDVNNE MLHGSYYQDR 180 LGDDINAFMF REAARLDPGA TLFVNDYNVE GGSDPNATPE KYIEQISALQ QKGAAVGGIG 240 LQGHVTNPVG EIICDALDKL ATTDLPVWLT ELDVSESDVD LRAEDLEVVL REAYAHPAVE 300 GVIFWGCMQG HMWRQDACLI DADGNVNDAG ESPDSIMQIR RSPEGVDIAR ARADRQRWTL 360 QIQGVPRHVH RAARDGDGEG AQDVLRGERG HPSRAGHEPL TITFTVP* 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3693 | XynA | 6.0e-37 | 75 | 315 | 261 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
| pfam00331 | Glyco_hydro_10 | 1.0e-74 | 52 | 329 | 298 | + Glycosyl hydrolase family 10. | ||
| smart00633 | Glyco_10 | 4.0e-78 | 87 | 330 | 265 | + Glycosyl hydrolase family 10. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACF83995.1 | 0 | 1 | 331 | 173 | 503 | unknown [Zea mays] |
| GenBank | ACN28310.1 | 0 | 1 | 331 | 173 | 503 | unknown [Zea mays] |
| GenBank | ACN35740.1 | 0 | 1 | 331 | 1 | 331 | unknown [Zea mays] |
| RefSeq | NP_001147907.1 | 0 | 1 | 331 | 174 | 504 | LOC100281517 [Zea mays] |
| RefSeq | XP_002455241.1 | 0 | 1 | 331 | 171 | 502 | hypothetical protein SORBIDRAFT_03g006950 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1i1x_A | 4e-31 | 56 | 327 | 18 | 289 | A Chain A, Structural Studies On The Mobility In The Active Site Of The Thermoascus Aurantiacus Xylanase I |
| PDB | 1i1w_A | 4e-31 | 56 | 327 | 18 | 289 | A Chain A, 0.89a Ultra High Resolution Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
| PDB | 1tux_A | 1e-30 | 56 | 327 | 18 | 289 | A Chain A, High Resolution Crystal Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
| PDB | 2bnj_A | 1e-30 | 56 | 327 | 18 | 289 | A Chain A, The Xylanase Ta From Thermoascus Aurantiacus Utilizes Arabinose Decorations Of Xylan As Significant Substrate Specificity Determinants |
| PDB | 1k6a_A | 4e-30 | 56 | 327 | 18 | 289 | A Chain A, Structural Studies On The Mobility In The Active Site Of The Thermoascus Aurantiacus Xylanase I |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| (1,4)-β-xylan degradation | 3.2.1.8-RXN | EC-3.2.1.8 | endo-1,4-β-xylanase |
| Hydropathy |
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