| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G003794_T03 |
| Family | CBM22 |
| Protein Properties | Length: 690 Molecular Weight: 75834.1 Isoelectric Point: 6.4713 |
| Chromosome | Chromosome/Scaffold: 3 Start: 20745018 End: 20747751 |
| Description | glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM22 | 131 | 273 | 1.4e-22 |
| EDDGLVAGWAAVGPCTALSARDEEPAKVPTETINDVADGYRPSGRYVLASGRAGEADGLRRALKRAALRPRVTYRVAGWVGLGDGDGDEGARHAVRVSLR VDGGCVVVDGGAVVCAEPGRWTEIKGAFRLKESPRDAEVYVHG | |||
| GH10 | 329 | 611 | 0 |
| VMQMDSSFPFGTCINTNVIQNPGFVDFFAKHFDWAVFENELKWYHTEAQQGQLNYSDSDALLDFCDRYGKPVRGHCIFWAVANTVQQWVKNLDDDQLASA VRARLQSLLTRYAGRFPHYDVNNEMLHGSYYQDRLGDDINAFMFREAARLDPGATLFVNDYNVEGGSDPNATPEKYIEQISALQQKGAAVGGIGLQGHVT NPVGEIICDALDKLATTDLPVWLTELDVSESDVDLRAEDLEVVLREAYAHPAVEGVIFWGCMQGHMWRQDACLIDADGNVNDA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 690 Download |
| MAGRILRILY CHSKAGAQRR PHTEREKTFP SVVVASSSHD AMEWRSFGAL YDNFRGGFDE 60 RTTDRLFIRS PAAILASRQQ ASFSIQPTSQ RSPLLRSLHW SHPPAGRVPT MACTQEVVVF 120 GVNLLESGAP EDDGLVAGWA AVGPCTALSA RDEEPAKVPT ETINDVADGY RPSGRYVLAS 180 GRAGEADGLR RALKRAALRP RVTYRVAGWV GLGDGDGDEG ARHAVRVSLR VDGGCVVVDG 240 GAVVCAEPGR WTEIKGAFRL KESPRDAEVY VHGAPAGVDV KVMDLQVFAT DRRARFRKLR 300 KKTDKVRKRD VVLNFGSAAS GISGASIRVM QMDSSFPFGT CINTNVIQNP GFVDFFAKHF 360 DWAVFENELK WYHTEAQQGQ LNYSDSDALL DFCDRYGKPV RGHCIFWAVA NTVQQWVKNL 420 DDDQLASAVR ARLQSLLTRY AGRFPHYDVN NEMLHGSYYQ DRLGDDINAF MFREAARLDP 480 GATLFVNDYN VEGGSDPNAT PEKYIEQISA LQQKGAAVGG IGLQGHVTNP VGEIICDALD 540 KLATTDLPVW LTELDVSESD VDLRAEDLEV VLREAYAHPA VEGVIFWGCM QGHMWRQDAC 600 LIDADGNVND AGESPDSIMQ IRRSPEGVDI ARARADRQRW TLQIQGVPRH VHRAARDGDG 660 EGAQDVLRGE RGHPSRAGHE PLTITFTVP* 720 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3693 | XynA | 7.0e-36 | 357 | 597 | 261 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
| pfam00331 | Glyco_hydro_10 | 3.0e-73 | 334 | 611 | 298 | + Glycosyl hydrolase family 10. | ||
| smart00633 | Glyco_10 | 6.0e-77 | 369 | 612 | 265 | + Glycosyl hydrolase family 10. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| GO:0016798 | hydrolase activity, acting on glycosyl bonds |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACF83995.1 | 0 | 111 | 613 | 1 | 503 | unknown [Zea mays] |
| GenBank | ACN28310.1 | 0 | 111 | 613 | 1 | 503 | unknown [Zea mays] |
| GenBank | EAY72426.1 | 0 | 111 | 613 | 1 | 495 | hypothetical protein OsI_00280 [Oryza sativa Indica Group] |
| RefSeq | NP_001147907.1 | 0 | 111 | 613 | 1 | 504 | LOC100281517 [Zea mays] |
| RefSeq | XP_002455241.1 | 0 | 111 | 613 | 1 | 502 | hypothetical protein SORBIDRAFT_03g006950 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1i1x_A | 1e-29 | 338 | 609 | 18 | 289 | A Chain A, Structure Of Apo Sucrose Phosphate Synthase (Sps) Of Halothermothrix Orenii |
| PDB | 1i1w_A | 1e-29 | 338 | 609 | 18 | 289 | A Chain A, 0.89a Ultra High Resolution Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
| PDB | 1tux_A | 3e-29 | 338 | 609 | 18 | 289 | A Chain A, High Resolution Crystal Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
| PDB | 2bnj_A | 4e-29 | 338 | 609 | 18 | 289 | A Chain A, The Xylanase Ta From Thermoascus Aurantiacus Utilizes Arabinose Decorations Of Xylan As Significant Substrate Specificity Determinants |
| PDB | 1gor_A | 2e-28 | 338 | 609 | 18 | 289 | A Chain A, The Xylanase Ta From Thermoascus Aurantiacus Utilizes Arabinose Decorations Of Xylan As Significant Substrate Specificity Determinants |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| (1,4)-β-xylan degradation | 3.2.1.8-RXN | EC-3.2.1.8 | endo-1,4-β-xylanase |
| Hydropathy |
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