| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G004699_T03 |
| Family | GH16 |
| Protein Properties | Length: 212 Molecular Weight: 24195.2 Isoelectric Point: 6.7933 |
| Chromosome | Chromosome/Scaffold: 4 Start: 191578887 End: 191580781 |
| Description | xyloglucan endotransglucosylase/hydrolase 5 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH16 | 50 | 178 | 1.8e-21 |
| IDGGREVQLYLDKSTGTGFQTRGSYLFGHFSMHMKLVGGDSAGTVTAFYLSSQNSEHDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKE YHSYSVLWNLYMIAFFVDDVPIRVFKNTS | |||
| Full Sequence |
|---|
| Protein Sequence Length: 212 Download |
| MATARWLQVA AMAVALLAEW ATAAAPRKPV DVPFQKNYVP TWAQDHIHYI DGGREVQLYL 60 DKSTGTGFQT RGSYLFGHFS MHMKLVGGDS AGTVTAFYLS SQNSEHDEID FEFLGNRTGQ 120 PYILQTNVFT GGKGDREQRI YLWFDPTKEY HSYSVLWNLY MIAFFVDDVP IRVFKNTSAE 180 VRRRYTIYNY CTDRDRYGAA VPPECARDRD V* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN03161 | PLN03161 | 0.0005 | 181 | 207 | 27 | + Probable xyloglucan endotransglucosylase/hydrolase protein; Provisional | ||
| cd02176 | GH16_XET | 2.0e-5 | 181 | 205 | 25 | + Xyloglucan endotransglycosylase, member of glycosyl hydrolase family 16. Xyloglucan endotransglycosylases (XETs) cleave and religate xyloglucan polymers in plant cell walls via a transglycosylation mechanism. Xyloglucan is a soluble hemicellulose with a backbone of beta-1,4-linked glucose units, partially substituted with alpha-1,6-linked xylopyranose branches. It binds noncovalently to cellulose, cross-linking the adjacent cellulose microfibrils, giving it a key structural role as a matrix polymer. Therefore, XET plays an important role in all plant processes that require cell wall remodeling. | ||
| pfam00722 | Glyco_hydro_16 | 3.0e-57 | 34 | 179 | 148 | + Glycosyl hydrolases family 16. | ||
| PLN03161 | PLN03161 | 8.0e-62 | 27 | 180 | 154 | + Probable xyloglucan endotransglucosylase/hydrolase protein; Provisional | ||
| cd02176 | GH16_XET | 1.0e-93 | 29 | 179 | 152 | + Xyloglucan endotransglycosylase, member of glycosyl hydrolase family 16. Xyloglucan endotransglycosylases (XETs) cleave and religate xyloglucan polymers in plant cell walls via a transglycosylation mechanism. Xyloglucan is a soluble hemicellulose with a backbone of beta-1,4-linked glucose units, partially substituted with alpha-1,6-linked xylopyranose branches. It binds noncovalently to cellulose, cross-linking the adjacent cellulose microfibrils, giving it a key structural role as a matrix polymer. Therefore, XET plays an important role in all plant processes that require cell wall remodeling. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005618 | cell wall |
| GO:0005975 | carbohydrate metabolic process |
| GO:0006073 | cellular glucan metabolic process |
| GO:0016762 | xyloglucan:xyloglucosyl transferase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACF88385.1 | 0 | 1 | 185 | 1 | 185 | unknown [Zea mays] |
| GenBank | ACF88385.1 | 0.0000000000001 | 179 | 211 | 265 | 297 | unknown [Zea mays] |
| RefSeq | NP_001148984.1 | 0 | 1 | 185 | 1 | 185 | xyloglucan endotransglucosylase/hydrolase [Zea mays] |
| RefSeq | NP_001148984.1 | 0.0000000000004 | 179 | 211 | 265 | 297 | xyloglucan endotransglucosylase/hydrolase [Zea mays] |
| RefSeq | XP_002449625.1 | 0 | 26 | 185 | 33 | 192 | hypothetical protein SORBIDRAFT_05g020400 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1un1_B | 0 | 19 | 177 | 2 | 160 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
| PDB | 1un1_B | 0.00000006 | 181 | 211 | 249 | 278 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
| PDB | 1un1_A | 0 | 19 | 177 | 2 | 160 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
| PDB | 1un1_A | 0.00000006 | 181 | 211 | 249 | 278 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
| PDB | 1umz_B | 0 | 19 | 177 | 2 | 160 | A Chain A, Xyloglucan Endotransglycosylase In Complex With The Xyloglucan Nonasaccharide Xllg. |
