| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G004856_T01 |
| Family | GH10 |
| Protein Properties | Length: 545 Molecular Weight: 59093.4 Isoelectric Point: 5.8592 |
| Chromosome | Chromosome/Scaffold: 5 Start: 163416736 End: 163419299 |
| Description | glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH10 | 226 | 517 | 0 |
| VQLDSAFPIGSCINGTVIQDPAFVDFFTSHMDWAVFENELKWYWTEAERGQLNYADADRLLDFCDRAGKPVRGHCIFWAVDGEVQQWVKDIGRDDPDQLM AAVRDRLGGLLGRYAGRFPHYDVNNEMLHGRFFRDRLGDGVPALMFREAARLDPAAALFVNDYNVECGGDPAATPERYVDLVRALQRGGARVGGVGMQGH VTHPVGEVICDALDTVYAATGLPVWFTEVDVCEPDDALRADDLEVVLREAFAHPAVQGVVLWGFMQGHMWRQDAALVNADGTVNDAGQRLID | |||
| Full Sequence |
|---|
| Protein Sequence Length: 545 Download |
| MACSPHHQGD VVFEANAIGW APSGARTALS LRHERDPARL PAAAVGGERT PSSGRYVLAA 60 GRGGEEDGLR QAIPPGALRP RVTYRVAGWA SVAVAAAEEE EEGARQQYRH HPVRVSIRVD 120 DGVVVECGAV ACSAASDSDS GSAAAGCSRW AEIKGAFRLR ECPRSAAVHV HGAPAGVDVK 180 VMDLRIVATD PKARFGYLKD KTDKVRKRDV VVKLSGAAAG ASVRVVQLDS AFPIGSCING 240 TVIQDPAFVD FFTSHMDWAV FENELKWYWT EAERGQLNYA DADRLLDFCD RAGKPVRGHC 300 IFWAVDGEVQ QWVKDIGRDD PDQLMAAVRD RLGGLLGRYA GRFPHYDVNN EMLHGRFFRD 360 RLGDGVPALM FREAARLDPA AALFVNDYNV ECGGDPAATP ERYVDLVRAL QRGGARVGGV 420 GMQGHVTHPV GEVICDALDT VYAATGLPVW FTEVDVCEPD DALRADDLEV VLREAFAHPA 480 VQGVVLWGFM QGHMWRQDAA LVNADGTVND AGQRLIDLRS EWMSDARGRL DADGQFRFRG 540 FHGT* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3693 | XynA | 1.0e-18 | 262 | 520 | 288 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
| pfam00331 | Glyco_hydro_10 | 1.0e-53 | 230 | 517 | 306 | + Glycosyl hydrolase family 10. | ||
| smart00633 | Glyco_10 | 9.0e-58 | 265 | 515 | 269 | + Glycosyl hydrolase family 10. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAH60862.1 | 0 | 10 | 543 | 6 | 518 | endo-1,4-beta-xylanase [Hordeum vulgare] |
| GenBank | EAY72426.1 | 0 | 1 | 544 | 1 | 526 | hypothetical protein OsI_00280 [Oryza sativa Indica Group] |
| GenBank | EAY97529.1 | 0 | 14 | 544 | 24 | 550 | hypothetical protein OsI_19457 [Oryza sativa Indica Group] |
| RefSeq | NP_001041947.1 | 0 | 1 | 544 | 1 | 526 | Os01g0134900 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001055187.1 | 0 | 14 | 544 | 24 | 550 | Os05g0319900 [Oryza sativa (japonica cultivar-group)] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1xyz_B | 2e-28 | 234 | 495 | 39 | 313 | A Chain A, A Common Protein Fold And Similar Active Site In Two Distinct Families Of Beta-Glycanases |
| PDB | 1xyz_A | 2e-28 | 234 | 495 | 39 | 313 | A Chain A, A Common Protein Fold And Similar Active Site In Two Distinct Families Of Beta-Glycanases |
| PDB | 1i1x_A | 1e-26 | 262 | 509 | 46 | 289 | A Chain A, A Common Protein Fold And Similar Active Site In Two Distinct Families Of Beta-Glycanases |
| PDB | 1i1w_A | 1e-26 | 262 | 509 | 46 | 289 | A Chain A, 0.89a Ultra High Resolution Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
| PDB | 2bnj_A | 2e-26 | 262 | 509 | 46 | 289 | A Chain A, The Xylanase Ta From Thermoascus Aurantiacus Utilizes Arabinose Decorations Of Xylan As Significant Substrate Specificity Determinants |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| (1,4)-β-xylan degradation | 3.2.1.8-RXN | EC-3.2.1.8 | endo-1,4-β-xylanase |
| Hydropathy |
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