| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G005082_T01 |
| Family | CBM43 |
| Protein Properties | Length: 497 Molecular Weight: 53989.4 Isoelectric Point: 5.6679 |
| Chromosome | Chromosome/Scaffold: 3 Start: 199622172 End: 199625529 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 366 | 448 | 3.8e-33 |
| WCIASTNASETDLQNALNWACGPGNVDCSAIQPSQPCYQPDTLASHASYAFNSYYQQNGANVVACDFGGAGIRTTKDPSYDTC | |||
| GH17 | 26 | 344 | 0 |
| IGVCYGRNADDLPAPDKVAQLIQQQSIKYVRIYDTNIDVIKAFANTGVELMVGVPNSDLLAFAQYQSNVDTWLKNSILPYYPDTMITYITVGAEVTESPT NVSALVVPAMRNVHTALKKAGLHKKITISSTHSLGILSRSFPPSAGAFNSSYAYFLKPMLQFLVENQAPFMVDLYPYYAYQNSRSNVSLNYALFSPESQD VIDPNTGLVYTNMFDAQVDSIFFALMALNFKTLKIMITESGWPNKGAVKETGATPDNAQTYNTNLIRHVVNDSGTPAKPGEEIDVYIFSLFNENRKPGIE SERNWGLFFPDKSSIYSLD | |||
| Full Sequence |
|---|
| Protein Sequence Length: 497 Download |
| MARRLMLALP VLLFLLLVGQ CHGGKIGVCY GRNADDLPAP DKVAQLIQQQ SIKYVRIYDT 60 NIDVIKAFAN TGVELMVGVP NSDLLAFAQY QSNVDTWLKN SILPYYPDTM ITYITVGAEV 120 TESPTNVSAL VVPAMRNVHT ALKKAGLHKK ITISSTHSLG ILSRSFPPSA GAFNSSYAYF 180 LKPMLQFLVE NQAPFMVDLY PYYAYQNSRS NVSLNYALFS PESQDVIDPN TGLVYTNMFD 240 AQVDSIFFAL MALNFKTLKI MITESGWPNK GAVKETGATP DNAQTYNTNL IRHVVNDSGT 300 PAKPGEEIDV YIFSLFNENR KPGIESERNW GLFFPDKSSI YSLDWTGRGN VDVMTGANIT 360 SANGTWCIAS TNASETDLQN ALNWACGPGN VDCSAIQPSQ PCYQPDTLAS HASYAFNSYY 420 QQNGANVVAC DFGGAGIRTT KDPSYDTCVY LAAGNKMSTT NSTSLPARSD SGPVPCAKCF 480 ATLLPMLAIV MAAVMV* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 0.002 | 260 | 337 | 81 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 1.0e-21 | 365 | 437 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 8.0e-41 | 365 | 450 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 1.0e-108 | 26 | 344 | 319 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACN28065.1 | 0 | 1 | 496 | 1 | 496 | unknown [Zea mays] |
| GenBank | EEC71452.1 | 0 | 19 | 496 | 16 | 493 | hypothetical protein OsI_03677 [Oryza sativa Indica Group] |
| RefSeq | NP_001044198.1 | 0 | 19 | 496 | 16 | 493 | Os01g0739700 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001144992.1 | 0 | 1 | 444 | 1 | 444 | hypothetical protein LOC100278152 [Zea mays] |
| RefSeq | XP_002456331.1 | 0 | 1 | 496 | 1 | 497 | hypothetical protein SORBIDRAFT_03g034100 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2cyg_A | 0 | 26 | 345 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3ur8_B | 0 | 26 | 346 | 3 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3ur8_A | 0 | 26 | 346 | 3 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3ur7_B | 0 | 26 | 346 | 3 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| PDB | 3ur7_A | 0 | 26 | 346 | 3 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
