| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G005798_T01 |
| Family | CBM43 |
| Protein Properties | Length: 489 Molecular Weight: 53466.4 Isoelectric Point: 5.7447 |
| Chromosome | Chromosome/Scaffold: 9 Start: 88524094 End: 88525898 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CBM43 | 377 | 457 | 2e-23 |
| WCVFDDGAEDKSKLPSNVQYACASGDCTALGYGCSCNGLDEKSNISYAFNMYFQMQDQDVRACDFEGLAKITDKNASTRGC | |||
| GH17 | 38 | 354 | 0 |
| VGVNWGSQLSHPLLPGSVVKMLKANRIARVKMFDADSWPVGALVDSGIEVMLGIPNDMLETMSSSYGNAQDWVKENVTAYGDKLKLKYVAVGNEPFLKAY NGSFMKTTFPALKNIQKALDEAGVGNTVKAVVPLNADVYVSPDDKPSSGAFRPDINGLMTDMVKFLHDHGAPFVVNIYPFLSLYQSDNFPFEFAFFDGGK NIQDKGGVTYSNVFDANYDTLVHALKKAGVPDLKVIVGEAGWPTDGNKYANFKLARRFYDGLLRKLAKNEGTPVRKGKMEVYLFGLFDEDMKSIAPGNFE RHWGIFTYDGKPKFPID | |||
| Full Sequence |
|---|
| Protein Sequence Length: 489 Download |
| MIRRQPGMDR FLQLLAAGVA VLLLVAPPAM ADDDIVEVGV NWGSQLSHPL LPGSVVKMLK 60 ANRIARVKMF DADSWPVGAL VDSGIEVMLG IPNDMLETMS SSYGNAQDWV KENVTAYGDK 120 LKLKYVAVGN EPFLKAYNGS FMKTTFPALK NIQKALDEAG VGNTVKAVVP LNADVYVSPD 180 DKPSSGAFRP DINGLMTDMV KFLHDHGAPF VVNIYPFLSL YQSDNFPFEF AFFDGGKNIQ 240 DKGGVTYSNV FDANYDTLVH ALKKAGVPDL KVIVGEAGWP TDGNKYANFK LARRFYDGLL 300 RKLAKNEGTP VRKGKMEVYL FGLFDEDMKS IAPGNFERHW GIFTYDGKPK FPIDLTGQGH 360 EKLLSPVTDV KYLPNQWCVF DDGAEDKSKL PSNVQYACAS GDCTALGYGC SCNGLDEKSN 420 ISYAFNMYFQ MQDQDVRACD FEGLAKITDK NASTRGCLFP VQIISASARV APALLLAALL 480 ALLVIVFV* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 9.0e-5 | 272 | 346 | 83 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 1.0e-15 | 376 | 445 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 5.0e-29 | 376 | 459 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 2.0e-73 | 38 | 354 | 319 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACR38156.1 | 0 | 1 | 465 | 1 | 465 | unknown [Zea mays] |
| GenBank | EAZ37505.1 | 0 | 32 | 462 | 27 | 456 | hypothetical protein OsJ_21839 [Oryza sativa Japonica Group] |
| RefSeq | NP_001057968.1 | 0 | 32 | 462 | 27 | 456 | Os06g0590600 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002438620.1 | 0 | 1 | 469 | 1 | 472 | hypothetical protein SORBIDRAFT_10g022940 [Sorghum bicolor] |
| RefSeq | XP_002530257.1 | 0 | 38 | 469 | 29 | 461 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3ur8_B | 0 | 38 | 356 | 3 | 315 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
| PDB | 3ur8_A | 0 | 38 | 356 | 3 | 315 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
| PDB | 3ur7_B | 0 | 38 | 356 | 3 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| PDB | 3ur7_A | 0 | 38 | 356 | 3 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| PDB | 4gzj_A | 0 | 38 | 356 | 3 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
