| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G009690_T01 |
| Family | GT47 |
| Protein Properties | Length: 454 Molecular Weight: 51197.5 Isoelectric Point: 8.618 |
| Chromosome | Chromosome/Scaffold: 1 Start: 52464440 End: 52467816 |
| Description | exostosin family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT47 | 58 | 375 | 0 |
| ALLRVFMYDLPPEFHFGLLDWKPPGFGGGVWPDVRDGVPDYPGGLNLQHSIEYWLTLDLLASEQGAPTPCAAARVRHAADADVVFVPFFASLSFNRHSRV VPPARNSEDRALQRRLLEFLAARPEWRRTGGRDHVVLAHHPNGMLDARYRFWPCVFVLCDFGRYPPSVANLDKDIIAPYRHLVANFANDTAGYDDRPTLL YFQGAIYRKDGGSIRQELYYLLKDEKDVHFSFGSVAGNGIEQATQGMRSSKFCLNIAGDTPSSNRLFDSIVSHCVPVIISDEIELPFEDVLDYSKFSVIV RGADAVKKGFLKSLIKGI | |||
| Full Sequence |
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| Protein Sequence Length: 454 Download |
| MATACRSPLV WLFALAAALF FLSWYLLLNS AAGPTAARRP NQGLRLGGPG RKCDPAEALL 60 RVFMYDLPPE FHFGLLDWKP PGFGGGVWPD VRDGVPDYPG GLNLQHSIEY WLTLDLLASE 120 QGAPTPCAAA RVRHAADADV VFVPFFASLS FNRHSRVVPP ARNSEDRALQ RRLLEFLAAR 180 PEWRRTGGRD HVVLAHHPNG MLDARYRFWP CVFVLCDFGR YPPSVANLDK DIIAPYRHLV 240 ANFANDTAGY DDRPTLLYFQ GAIYRKDGGS IRQELYYLLK DEKDVHFSFG SVAGNGIEQA 300 TQGMRSSKFC LNIAGDTPSS NRLFDSIVSH CVPVIISDEI ELPFEDVLDY SKFSVIVRGA 360 DAVKKGFLKS LIKGISQEEW TRMWNKLKEV EKHFEYQYPS QTDDAVQMIW KAIARKVPSI 420 RLKINRLRRF SRFDTNRTDE TLPSPSWLQN QAS* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03016 | Exostosin | 1.0e-54 | 60 | 375 | 326 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACF84601.1 | 0 | 52 | 452 | 60 | 461 | unknown [Zea mays] |
| RefSeq | NP_001049980.1 | 0 | 42 | 453 | 52 | 468 | Os03g0324700 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001131151.1 | 0 | 64 | 452 | 1 | 390 | hypothetical protein LOC100192459 [Zea mays] |
| RefSeq | NP_001136572.1 | 0 | 1 | 453 | 1 | 453 | hypothetical protein LOC100216694 [Zea mays] |
| RefSeq | XP_002467934.1 | 0 | 41 | 452 | 47 | 461 | hypothetical protein SORBIDRAFT_01g036720 [Sorghum bicolor] |
