| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G012140_T01 |
| Family | CBM43 |
| Protein Properties | Length: 452 Molecular Weight: 45396.7 Isoelectric Point: 5.1095 |
| Chromosome | Chromosome/Scaffold: 9 Start: 126718179 End: 126723107 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 248 | 329 | 9.5e-30 |
| CVALQDADPAALQAGLNWACGPGHADCSAIQPGGACYQQNNLPAIASYAYNDYYQEMASTGATCSFNGTATTTTNDPSSGSC | |||
| GH17 | 19 | 180 | 3.4e-32 |
| LGVLMASESSSSEFAKIVQSKQTRQARLCGADSELLSSLAGSDAEVMVTIPNEQLEHVAEFQEEADLWVAANVARFLPSTRITHVVAGDDVPANSPGSAH FLVPAMLNLRSALVAAGLGGRVKVSSAMSGEALSAPAWSGVVGHVLRFLESAGSPLLLKSSS | |||
| Full Sequence |
|---|
| Protein Sequence Length: 452 Download |
| MLQKRWKGCI FFLLLSGALG VLMASESSSS EFAKIVQSKQ TRQARLCGAD SELLSSLAGS 60 DAEVMVTIPN EQLEHVAEFQ EEADLWVAAN VARFLPSTRI THVVAGDDVP ANSPGSAHFL 120 VPAMLNLRSA LVAAGLGGRV KVSSAMSGEA LSAPAWSGVV GHVLRFLESA GSPLLLKSSS 180 RPSEEASDAR VGRAYAAMRA LGVSGVPVIA TDLAAGGDAV PYYYSYYGYG YPGGHGRRRS 240 LATTGTFCVA LQDADPAALQ AGLNWACGPG HADCSAIQPG GACYQQNNLP AIASYAYNDY 300 YQEMASTGAT CSFNGTATTT TNDPSSGSCV FAGSSTAGGS SNSSVPVGAS PPTSLSPPTG 360 FAPPVGSSPP SSSSEFSPPA VGTAPLSGFT PPDGGGFGTP PGSFNGTGTF GPSGTLSPYN 420 GGAPGLSRAG LSLTALSAAA VAVLLASIDA M* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07983 | X8 | 6.0e-14 | 246 | 318 | 82 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| pfam00332 | Glyco_hydro_17 | 3.0e-20 | 19 | 171 | 163 | + Glycosyl hydrolases family 17. | ||
| smart00768 | X8 | 5.0e-31 | 246 | 331 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EEC75349.1 | 0 | 1 | 333 | 2 | 352 | hypothetical protein OsI_11774 [Oryza sativa Indica Group] |
| RefSeq | NP_001050214.1 | 0 | 1 | 410 | 2 | 432 | Os03g0374600 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002463238.1 | 0 | 237 | 367 | 48 | 172 | hypothetical protein SORBIDRAFT_02g040340 [Sorghum bicolor] |
| RefSeq | XP_002467792.1 | 0 | 23 | 451 | 1 | 427 | hypothetical protein SORBIDRAFT_01g034190 [Sorghum bicolor] |
| RefSeq | XP_002532062.1 | 0 | 19 | 331 | 30 | 385 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2cyg_A | 0.0000000000001 | 30 | 203 | 16 | 198 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 4gzj_A | 0.0000000000006 | 28 | 175 | 16 | 174 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 4gzi_A | 0.0000000000006 | 28 | 175 | 16 | 174 | A Chain A, Active-site Mutant Of Potato Endo-1,3-beta-glucanase In Complex With Laminaratriose |
| PDB | 3ur8_B | 0.0000000000006 | 28 | 175 | 16 | 174 | A Chain A, Active-site Mutant Of Potato Endo-1,3-beta-glucanase In Complex With Laminaratriose |
| PDB | 3ur8_A | 0.0000000000006 | 28 | 175 | 16 | 174 | A Chain A, Active-site Mutant Of Potato Endo-1,3-beta-glucanase In Complex With Laminaratriose |
