| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G019771_T01 |
| Family | CBM43 |
| Protein Properties | Length: 151 Molecular Weight: 15362.9 Isoelectric Point: 5.0189 |
| Chromosome | Chromosome/Scaffold: 8 Start: 74621860 End: 74622668 |
| Description | Carbohydrate-binding X8 domain superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CBM43 | 58 | 136 | 1.4e-34 |
| WCVASPSASATALRVALDYACGQGGADCSAIQQGGSCFSPDTVRDHASYAFNSYYQKNPVQTSCDFGGTAALTTADPSK | |||
| Full Sequence |
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| Protein Sequence Length: 151 Download |
| MMVCFTLSAG GGSEQGADVA AERLERDVTS PLATVPVVDP TAAAAATTTQ SPATGGSWCV 60 ASPSASATAL RVALDYACGQ GGADCSAIQQ GGSCFSPDTV RDHASYAFNS YYQKNPVQTS 120 CDFGGTAALT TADPSKLSST RRGRDHQGKL F |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07983 | X8 | 8.0e-22 | 57 | 127 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 2.0e-35 | 57 | 135 | 80 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EEC79758.1 | 0 | 10 | 143 | 25 | 198 | hypothetical protein OsI_21142 [Oryza sativa Indica Group] |
| GenBank | EEE64827.1 | 0 | 10 | 138 | 25 | 189 | hypothetical protein OsJ_19684 [Oryza sativa Japonica Group] |
| RefSeq | NP_001056434.1 | 0 | 10 | 139 | 25 | 190 | Os05g0581900 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002441577.1 | 0 | 10 | 135 | 22 | 151 | hypothetical protein SORBIDRAFT_09g029700 [Sorghum bicolor] |
| RefSeq | XP_002519744.1 | 1e-39 | 24 | 136 | 64 | 193 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2jon_A | 4e-20 | 46 | 135 | 1 | 90 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
| Hydropathy |
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