| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G019771_T02 |
| Family | CBM43 |
| Protein Properties | Length: 234 Molecular Weight: 23010.3 Isoelectric Point: 4.2255 |
| Chromosome | Chromosome/Scaffold: 8 Start: 74621038 End: 74622662 |
| Description | Carbohydrate-binding X8 domain superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 58 | 140 | 2.1e-35 |
| WCVASPSASATALRVALDYACGQGGADCSAIQQGGSCFSPDTVRDHASYAFNSYYQKNPVQTSCDFGGTAALTTADPSTSTCQ | |||
| Full Sequence |
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| Protein Sequence Length: 234 Download |
| MMVCFTLSAG GGSEQGADVA AERLERDVTS PLATVPVVDP TAAAAATTTQ SPATGGSWCV 60 ASPSASATAL RVALDYACGQ GGADCSAIQQ GGSCFSPDTV RDHASYAFNS YYQKNPVQTS 120 CDFGGTAALT TADPSTSTCQ YPSTSTGASV LNTSTPLTPT NGSPPGPGYG SSPPAGYANS 180 PPLYGNMSPP DYGDNISAAA RALPGRKTTA TAAVASLATT CLLTAALSLT VSG* 240 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07983 | X8 | 1.0e-20 | 57 | 127 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 2.0e-36 | 57 | 141 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EEC79758.1 | 0 | 10 | 222 | 25 | 267 | hypothetical protein OsI_21142 [Oryza sativa Indica Group] |
| GenBank | EEE64827.1 | 0 | 10 | 231 | 25 | 276 | hypothetical protein OsJ_19684 [Oryza sativa Japonica Group] |
| RefSeq | NP_001056434.1 | 0 | 10 | 222 | 25 | 277 | Os05g0581900 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001131448.1 | 0 | 57 | 232 | 108 | 296 | hypothetical protein LOC100192780 [Zea mays] |
| RefSeq | XP_002441577.1 | 0 | 10 | 233 | 22 | 247 | hypothetical protein SORBIDRAFT_09g029700 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2jon_A | 1e-21 | 46 | 146 | 1 | 101 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
| Hydropathy |
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