| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G020898_T01 |
| Family | CBM43 |
| Protein Properties | Length: 487 Molecular Weight: 51461.4 Isoelectric Point: 6.6178 |
| Chromosome | Chromosome/Scaffold: 2 Start: 233762066 End: 233766022 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CBM43 | 367 | 448 | 1.1e-26 |
| WCALNPRAKDLGRLGANVDYACTFADCTPLGYGSTCGGMDVAGNASYAFNAYYQAQNQKDEACDFQGLALPTETDPSTATCN | |||
| GH17 | 22 | 344 | 0 |
| LGVNWGTQATHPLPPKAVVQVLRDNGIKKVKLFDADPAAMRALAGTGIEVMVAIPNAMLAGLAADAGQARNWVKHNVRRYDFDGGVTIKYVAVGNEPFLE SYNGSFINVTLPALKNVQNALNDAGIGDRIKATVPLNADVYNSPRSNPVPSAGRFRADIAGLMADMVRFLARNGAPFTVNIYPFLSLYLNEHFPLDYAFF DGGAAPVDDHGVLYTNVFDANFDTLVAALGAVGHGDMPVVVGEVGWPTDGDRHAKASYAQRFYAGLLRRLAANTGTPARPGQRPAEVYLFGLVDEDAKSV APGNFERHWGVLRYDGQPKFAMD | |||
| Full Sequence |
|---|
| Protein Sequence Length: 487 Download |
| MAARLAAAVL LCACAVGPAT ALGVNWGTQA THPLPPKAVV QVLRDNGIKK VKLFDADPAA 60 MRALAGTGIE VMVAIPNAML AGLAADAGQA RNWVKHNVRR YDFDGGVTIK YVAVGNEPFL 120 ESYNGSFINV TLPALKNVQN ALNDAGIGDR IKATVPLNAD VYNSPRSNPV PSAGRFRADI 180 AGLMADMVRF LARNGAPFTV NIYPFLSLYL NEHFPLDYAF FDGGAAPVDD HGVLYTNVFD 240 ANFDTLVAAL GAVGHGDMPV VVGEVGWPTD GDRHAKASYA QRFYAGLLRR LAANTGTPAR 300 PGQRPAEVYL FGLVDEDAKS VAPGNFERHW GVLRYDGQPK FAMDLTGQGR DTTLVPARGV 360 AYLSRTWCAL NPRAKDLGRL GANVDYACTF ADCTPLGYGS TCGGMDVAGN ASYAFNAYYQ 420 AQNQKDEACD FQGLALPTET DPSTATCNFT IQIQTGAAAM ASLGRSASAA ALVLASASLQ 480 LLALLW* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00925 | GTP_cyclohydro2 | 0.006 | 41 | 76 | 36 | + GTP cyclohydrolase II. GTP cyclohydrolase II catalyzes the first committed step in the biosynthesis of riboflavin. | ||
| COG5309 | COG5309 | 0.0002 | 256 | 336 | 81 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 8.0e-19 | 366 | 435 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 5.0e-32 | 366 | 449 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 3.0e-78 | 22 | 344 | 324 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACG29689.1 | 0 | 18 | 486 | 17 | 485 | glucan endo-1,3-beta-glucosidase 5 precursor [Zea mays] |
| DDBJ | BAF20898.2 | 0 | 25 | 454 | 107 | 531 | Os07g0168600 [Oryza sativa Japonica Group] |
| RefSeq | NP_001058984.1 | 0 | 25 | 454 | 28 | 452 | Os07g0168600 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001130924.1 | 0 | 1 | 486 | 1 | 486 | hypothetical protein LOC100192029 [Zea mays] |
| RefSeq | XP_002459388.1 | 0 | 9 | 464 | 17 | 470 | hypothetical protein SORBIDRAFT_02g003910 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2cyg_A | 0 | 22 | 345 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_D | 5.60519e-45 | 22 | 346 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_C | 5.60519e-45 | 22 | 346 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_B | 5.60519e-45 | 22 | 346 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_A | 5.60519e-45 | 22 | 346 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
