| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G022398_T01 |
| Family | GT47 |
| Protein Properties | Length: 392 Molecular Weight: 44629.7 Isoelectric Point: 6.9071 |
| Chromosome | Chromosome/Scaffold: 9 Start: 133207936 End: 133211226 |
| Description | exostosin family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT47 | 1 | 312 | 0 |
| MYDLPPEFHFGLLDWKPPGFGGGVWPDIRDGVPDYPGGLNLQHSIEYWLTLDLLASEQGAPTPCAVARVRHAADADVVFVPFFASLSFNRHSRVVPPARD SEDRALQRRLLEFLAARPEWRRTGGRDHVVLAHHPNGMLDARYRFWPCVFVLCDFGRYPPSVANLDKDVIAPYRHLVANFANDTAGYDDRPTLLYFQGAI YRKDGGFIRQELYYLLKDEKDVHFSFGSVAGNGIEQATQGMRSSKFCLNIAGDTPSSNRLFDSIVSHCVPVTISDEIELPFEDVLDYSKFSVIVRGADAV KKGFLMNLIKGI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 392 Download |
| MYDLPPEFHF GLLDWKPPGF GGGVWPDIRD GVPDYPGGLN LQHSIEYWLT LDLLASEQGA 60 PTPCAVARVR HAADADVVFV PFFASLSFNR HSRVVPPARD SEDRALQRRL LEFLAARPEW 120 RRTGGRDHVV LAHHPNGMLD ARYRFWPCVF VLCDFGRYPP SVANLDKDVI APYRHLVANF 180 ANDTAGYDDR PTLLYFQGAI YRKDGGFIRQ ELYYLLKDEK DVHFSFGSVA GNGIEQATQG 240 MRSSKFCLNI AGDTPSSNRL FDSIVSHCVP VTISDEIELP FEDVLDYSKF SVIVRGADAV 300 KKGFLMNLIK GISREEWTRM WNRLKEVEKH FEYQYPSQTD DAVQMIWKAI ARKVPSIRLK 360 INRLQRFSLF ETNRTDETLP PSSSWLQNQA P* 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03016 | Exostosin | 3.0e-48 | 1 | 312 | 322 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACF84601.1 | 0 | 1 | 391 | 72 | 462 | unknown [Zea mays] |
| RefSeq | NP_001049980.1 | 0 | 1 | 389 | 74 | 466 | Os03g0324700 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001131151.1 | 0 | 1 | 391 | 1 | 391 | hypothetical protein LOC100192459 [Zea mays] |
| RefSeq | NP_001136572.1 | 0 | 1 | 390 | 64 | 452 | hypothetical protein LOC100216694 [Zea mays] |
| RefSeq | XP_002467934.1 | 0 | 1 | 391 | 72 | 462 | hypothetical protein SORBIDRAFT_01g036720 [Sorghum bicolor] |
| Hydropathy |
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