| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G022398_T02 |
| Family | GT47 |
| Protein Properties | Length: 463 Molecular Weight: 52275.7 Isoelectric Point: 8.2709 |
| Chromosome | Chromosome/Scaffold: 9 Start: 133207985 End: 133211307 |
| Description | exostosin family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT47 | 66 | 383 | 0 |
| ALLRVFMYDLPPEFHFGLLDWKPPGFGGGVWPDIRDGVPDYPGGLNLQHSIEYWLTLDLLASEQGAPTPCAVARVRHAADADVVFVPFFASLSFNRHSRV VPPARDSEDRALQRRLLEFLAARPEWRRTGGRDHVVLAHHPNGMLDARYRFWPCVFVLCDFGRYPPSVANLDKDVIAPYRHLVANFANDTAGYDDRPTLL YFQGAIYRKDGGFIRQELYYLLKDEKDVHFSFGSVAGNGIEQATQGMRSSKFCLNIAGDTPSSNRLFDSIVSHCVPVTISDEIELPFEDVLDYSKFSVIV RGADAVKKGFLMNLIKGI | |||
| Full Sequence |
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| Protein Sequence Length: 463 Download |
| MAAAAACRSP LVWLFALVTA LFFFSWYLLL DSAAGPAAAR RPNQWLRLGG GGRRSGPGRK 60 CDPAEALLRV FMYDLPPEFH FGLLDWKPPG FGGGVWPDIR DGVPDYPGGL NLQHSIEYWL 120 TLDLLASEQG APTPCAVARV RHAADADVVF VPFFASLSFN RHSRVVPPAR DSEDRALQRR 180 LLEFLAARPE WRRTGGRDHV VLAHHPNGML DARYRFWPCV FVLCDFGRYP PSVANLDKDV 240 IAPYRHLVAN FANDTAGYDD RPTLLYFQGA IYRKDGGFIR QELYYLLKDE KDVHFSFGSV 300 AGNGIEQATQ GMRSSKFCLN IAGDTPSSNR LFDSIVSHCV PVTISDEIEL PFEDVLDYSK 360 FSVIVRGADA VKKGFLMNLI KGISREEWTR MWNRLKEVEK HFEYQYPSQT DDAVQMIWKA 420 IARKVPSIRL KINRLQRFSL FETNRTDETL PPSSSWLQNQ AP* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03016 | Exostosin | 6.0e-50 | 68 | 383 | 326 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACF84601.1 | 0 | 43 | 462 | 43 | 462 | unknown [Zea mays] |
| RefSeq | NP_001049980.1 | 0 | 37 | 460 | 38 | 466 | Os03g0324700 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001131151.1 | 0 | 72 | 462 | 1 | 391 | hypothetical protein LOC100192459 [Zea mays] |
| RefSeq | NP_001136572.1 | 0 | 33 | 461 | 31 | 452 | hypothetical protein LOC100216694 [Zea mays] |
| RefSeq | XP_002467934.1 | 0 | 43 | 462 | 47 | 462 | hypothetical protein SORBIDRAFT_01g036720 [Sorghum bicolor] |
