| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G024561_T01 |
| Family | CBM43 |
| Protein Properties | Length: 188 Molecular Weight: 19016.5 Isoelectric Point: 7.6852 |
| Chromosome | Chromosome/Scaffold: 5 Start: 162895100 End: 162901470 |
| Description | Carbohydrate-binding X8 domain superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 30 | 113 | 3.3e-32 |
| WCIARSGASDKALQSALDYACGPAGGADCAPILTSGLCYLPNTLAAHASYAFNSIFQRSRAAPGACDFAGTATVTLTDPSYGSC | |||
| Full Sequence |
|---|
| Protein Sequence Length: 188 Download |
| MRRRGRLPAV LWLVAVTLAA LLARPANAAW CIARSGASDK ALQSALDYAC GPAGGADCAP 60 ILTSGLCYLP NTLAAHASYA FNSIFQRSRA APGACDFAGT ATVTLTDPSY GSCTYPSSPS 120 TAGQTGSPGS TSMPGTPTSL SPKGTGSTGG LNPPDVDSTD SNAEPLATAS LSSLALLCFM 180 YMFLQLW* 240 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07218 | RAP1 | 0.0002 | 98 | 161 | 74 | + Rhoptry-associated protein 1 (RAP-1). This family consists of several rhoptry-associated protein 1 (RAP-1) sequences which appear to be specific to Plasmodium falciparum. | ||
| pfam07983 | X8 | 2.0e-11 | 30 | 102 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 2.0e-27 | 30 | 115 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACN33807.1 | 0 | 1 | 109 | 1 | 109 | unknown [Zea mays] |
| DDBJ | BAH91705.1 | 0 | 28 | 187 | 32 | 189 | Os02g0503300 [Oryza sativa Japonica Group] |
| RefSeq | NP_001148424.1 | 0 | 1 | 187 | 1 | 187 | glucan endo-1,3-beta-glucosidase 4 [Zea mays] |
| RefSeq | XP_002267551.1 | 1.4013e-45 | 28 | 186 | 48 | 210 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002452133.1 | 0 | 1 | 187 | 1 | 192 | hypothetical protein SORBIDRAFT_04g020230 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2jon_A | 3e-21 | 29 | 117 | 12 | 98 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
