| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G025598_T01 |
| Family | GT41 |
| Protein Properties | Length: 707 Molecular Weight: 79681.2 Isoelectric Point: 6.8034 |
| Chromosome | Chromosome/Scaffold: 5 Start: 161465506 End: 161472233 |
| Description | Tetratricopeptide repeat (TPR)-like superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT41 | 313 | 474 | 0 |
| KAEGKHCRLKVGYVSSDFGNHPLSHLMGSVFGMHDRANIEVFCYALSQNDGTEWRQRIQSEAEHFVDVSAMTSDNIAKLINQDKIQILINLNGYTKGARN EIFAMQPAPIQVSYMGFPGTTGAAYIDYLVTDEFVSPSSYAHIYSEKLVHLPHCYFVNDYKQ | |||
| GT41 | 485 | 688 | 0 |
| PHKRSDYGLPEDKFIFACFNQLYKMDPEIFDTWCNILKRVPNSALWLLRFPAAGETRVRAYAAARGVRSDQIVFTDVAMKNEHIRRSALADLFLDTPLCN AHTTGTDILWAGLPMITLPLEKMATRVAGSLCVATGLGEEMIVSSMKKYEDRAVELALNPVKLQALTNKLKEVRMTCPLFDTARWVRNLERAYYKMWNLY CSSR | |||
| Full Sequence |
|---|
| Protein Sequence Length: 707 Download |
| MPQDAIMCYQ RALQARPDYA MAYGNLATIY YEQGQLDMAI RCYNQAIVYD PQFIEAYNNM 60 GNALKDAGRV EEAINCYRSC LALQANHPQA LTNLGNIYME WNMISAATSF YKAAISVTSG 120 LSSPLNNLAV IYKQQGNYAD AITCYTEVLR IDPTAADALV NRGNTFKEIG RVNEAIQDYV 180 QAATIRPNMP EAHANLASAY KDSGHVETAI ISYKQALRLR PDFPEATCNL LHTLQCVCDW 240 ENRDGMFRDV EEIIRRQIKM SVLPSVQPFH AIAYPIDPLL ALEISRKYAA HCSLIASRFG 300 LPPFVHPPPV PVKAEGKHCR LKVGYVSSDF GNHPLSHLMG SVFGMHDRAN IEVFCYALSQ 360 NDGTEWRQRI QSEAEHFVDV SAMTSDNIAK LINQDKIQIL INLNGYTKGA RNEIFAMQPA 420 PIQVSYMGFP GTTGAAYIDY LVTDEFVSPS SYAHIYSEKL VHLPHCYFVN DYKQKNRDCL 480 TPVCPHKRSD YGLPEDKFIF ACFNQLYKMD PEIFDTWCNI LKRVPNSALW LLRFPAAGET 540 RVRAYAAARG VRSDQIVFTD VAMKNEHIRR SALADLFLDT PLCNAHTTGT DILWAGLPMI 600 TLPLEKMATR VAGSLCVATG LGEEMIVSSM KKYEDRAVEL ALNPVKLQAL TNKLKEVRMT 660 CPLFDTARWV RNLERAYYKM WNLYCSSRHP EPFKVVEDDN ESPFDR* 720 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd00189 | TPR | 5.0e-19 | 125 | 222 | 98 | + Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans in various subcellular locations; involved in a variety of functions including protein-protein interactions, but common features in the interaction partners have not been defined; involved in chaperone, cell-cycle, transciption, and protein transport complexes; the number of TPR motifs varies among proteins (1,3-11,13 15,16,19); 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accomodate an alpha-helix of a target protein; it has been proposed that TPR proteins preferably interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes; examples of TPR-proteins include, Cdc16p, Cdc23p and Cdc27p components of the cyclosome/APC, the Pex5p/Pas10p receptor for peroxisomal targeting signals, the Tom70p co-receptor for mitochondrial targeting signals, Ser/Thr phosphatase 5C and the p110 subunit of O-GlcNAc transferase; three copies of the repeat are present here | ||
| cd00189 | TPR | 4.0e-21 | 3 | 86 | 84 | + Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans in various subcellular locations; involved in a variety of functions including protein-protein interactions, but common features in the interaction partners have not been defined; involved in chaperone, cell-cycle, transciption, and protein transport complexes; the number of TPR motifs varies among proteins (1,3-11,13 15,16,19); 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accomodate an alpha-helix of a target protein; it has been proposed that TPR proteins preferably interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes; examples of TPR-proteins include, Cdc16p, Cdc23p and Cdc27p components of the cyclosome/APC, the Pex5p/Pas10p receptor for peroxisomal targeting signals, the Tom70p co-receptor for mitochondrial targeting signals, Ser/Thr phosphatase 5C and the p110 subunit of O-GlcNAc transferase; three copies of the repeat are present here | ||
| pfam13844 | Glyco_transf_41 | 2.0e-70 | 488 | 681 | 194 | + Glycosyl transferase family 41. This family of glycosyltransferases includes O-linked beta-N-acetylglucosamine (O-GlcNAc) transferase, an enzyme which catalyzes the addition of O-GlcNAc to serine and threonine residues. In addition to its function as an O-GlcNAc transferase, human OGT, also appears to proteolytically cleave the epigenetic cell-cycle regulator HCF-1. | ||
| pfam13844 | Glyco_transf_41 | 1.0e-71 | 321 | 474 | 155 | + Glycosyl transferase family 41. This family of glycosyltransferases includes O-linked beta-N-acetylglucosamine (O-GlcNAc) transferase, an enzyme which catalyzes the addition of O-GlcNAc to serine and threonine residues. In addition to its function as an O-GlcNAc transferase, human OGT, also appears to proteolytically cleave the epigenetic cell-cycle regulator HCF-1. | ||
| COG3914 | Spy | 5.0e-101 | 126 | 684 | 568 | + Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005515 | protein binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACN26645.1 | 0 | 1 | 706 | 304 | 1009 | unknown [Zea mays] |
| GenBank | ACN26645.1 | 1e-32 | 5 | 230 | 172 | 397 | unknown [Zea mays] |
| GenBank | ACN26645.1 | 3e-32 | 10 | 235 | 143 | 368 | unknown [Zea mays] |
| GenBank | ACN26645.1 | 6e-27 | 26 | 230 | 125 | 329 | unknown [Zea mays] |
| GenBank | ACN26645.1 | 0.0002 | 134 | 230 | 97 | 193 | unknown [Zea mays] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 4gz6_D | 0 | 87 | 472 | 8 | 390 | A Chain A, Crystal Structure Of Staphylococcal Phosphoglycerate Kinase |
| PDB | 4gz6_D | 0 | 488 | 691 | 514 | 716 | A Chain A, Crystal Structure Of Staphylococcal Phosphoglycerate Kinase |
| PDB | 4gz6_D | 7e-18 | 17 | 161 | 6 | 150 | A Chain A, Crystal Structure Of Staphylococcal Phosphoglycerate Kinase |
| PDB | 4gz6_D | 9e-16 | 3 | 129 | 26 | 152 | A Chain A, Crystal Structure Of Staphylococcal Phosphoglycerate Kinase |
| PDB | 4gz6_D | 0.000000000001 | 3 | 101 | 60 | 161 | A Chain A, Crystal Structure Of Staphylococcal Phosphoglycerate Kinase |
| Hydropathy |
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