| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G031004_T01 |
| Family | GH10 |
| Protein Properties | Length: 592 Molecular Weight: 64556.4 Isoelectric Point: 5.973 |
| Chromosome | Chromosome/Scaffold: 3 Start: 21259937 End: 21262698 |
| Description | glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH10 | 244 | 527 | 0 |
| VVQVQNSVPIGSCITKAGMQNPEYVDFFTKHFDWAVLENELKWYYTEAVRGQVSYADADELIDFCDRHGKPVRGHCIFWAVENSVQPWVRALSADQLRAA VEARLRGLVSRYAGRFPHYEVNNEMLHGAFYQQRLGDDINAHMFRETAQIDPAPALFVNDYNVESANDPNATPEKYVALVTDLQRRGAPVGGIGVQGHVT HPVGDIICDALDKLAVTGLPIWITELDVSAADESVRADDLEIVLREAFAHPAVEGIMLWGFMQGHMWRSHGQLVNADGKYTQAG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 592 Download |
| MAFAEEETTR YLGTNLIESC GDSEDGLAGW APSGSCTLSA HADEDASLPS LAAALSAAAG 60 GDDEGDDSDE DEFQQRAPRP SGRYVLAARR ASDKDGLCRA VSRAPIRPNV TYRVAGWVGL 120 GAAVDGSHAV HVEVRVDGGG RPVGGGVAVV ESGKWGQIKG SFRVDCDEPP RHAKVYVHGP 180 PAGVDLKVTT DLQVCAVNKI PRLRHLRKKA DKVRKRDVVL KVSRRTDVDD DDTTASVAGA 240 HIQVVQVQNS VPIGSCITKA GMQNPEYVDF FTKHFDWAVL ENELKWYYTE AVRGQVSYAD 300 ADELIDFCDR HGKPVRGHCI FWAVENSVQP WVRALSADQL RAAVEARLRG LVSRYAGRFP 360 HYEVNNEMLH GAFYQQRLGD DINAHMFRET AQIDPAPALF VNDYNVESAN DPNATPEKYV 420 ALVTDLQRRG APVGGIGVQG HVTHPVGDII CDALDKLAVT GLPIWITELD VSAADESVRA 480 DDLEIVLREA FAHPAVEGIM LWGFMQGHMW RSHGQLVNAD GKYTQAGNMF AGLRREWTSH 540 ARGKVDSIGN FKFRGFHGTY QVLLTTPAGE VKKRTFDVHK GDAPLVLDMD F* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3693 | XynA | 3.0e-38 | 273 | 513 | 262 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
| pfam00331 | Glyco_hydro_10 | 6.0e-73 | 252 | 522 | 291 | + Glycosyl hydrolase family 10. | ||
| smart00633 | Glyco_10 | 1.0e-77 | 284 | 530 | 268 | + Glycosyl hydrolase family 10. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACF84241.1 | 0 | 1 | 591 | 1 | 591 | unknown [Zea mays] |
| GenBank | EAY72425.1 | 0 | 1 | 591 | 1 | 567 | hypothetical protein OsI_00279 [Oryza sativa Indica Group] |
| GenBank | EEE53821.1 | 0 | 32 | 591 | 39 | 575 | hypothetical protein OsJ_00270 [Oryza sativa Japonica Group] |
| RefSeq | NP_001147589.1 | 0 | 1 | 591 | 1 | 585 | endo-1,4-beta-xylanase [Zea mays] |
| RefSeq | XP_002455242.1 | 0 | 13 | 591 | 20 | 594 | hypothetical protein SORBIDRAFT_03g006980 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1e0v_A | 2e-31 | 253 | 522 | 16 | 288 | A Chain A, Xylanase 10a From Sreptomyces Lividans. Cellobiosyl-Enzyme Intermediate At 1.7 A |
| PDB | 1v0n_A | 3e-31 | 253 | 522 | 16 | 288 | A Chain A, Xylanase 10a From Sreptomyces Lividans. Cellobiosyl-Enzyme Intermediate At 1.7 A |
| PDB | 1v0m_A | 3e-31 | 253 | 522 | 16 | 288 | A Chain A, Xylanase 10a From Sreptomyces Lividans. Cellobiosyl-Enzyme Intermediate At 1.7 A |
| PDB | 1v0l_A | 3e-31 | 253 | 522 | 16 | 288 | A Chain A, Xylanase 10a From Sreptomyces Lividans. Cellobiosyl-Enzyme Intermediate At 1.7 A |
| PDB | 1v0k_A | 3e-31 | 253 | 522 | 16 | 288 | A Chain A, Xylanase 10a From Sreptomyces Lividans. Cellobiosyl-Enzyme Intermediate At 1.7 A |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| (1,4)-β-xylan degradation | 3.2.1.8-RXN | EC-3.2.1.8 | endo-1,4-β-xylanase |
| Hydropathy |
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