| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G031477_T01 |
| Family | CBM43 |
| Protein Properties | Length: 437 Molecular Weight: 43053.9 Isoelectric Point: 5.7241 |
| Chromosome | Chromosome/Scaffold: 10 Start: 141955383 End: 141959358 |
| Description | Carbohydrate-binding X8 domain superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 346 | 423 | 7.9e-31 |
| WCVAKPTVPDPIIQEAMDYACGAGAGCDSILPSGSCYRPNTVLAHASFAFNSYWQQAKATGGTCDFGGTATIVTRDPR | |||
| Full Sequence |
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| Protein Sequence Length: 437 Download |
| MACMADPHRC SSSCAPLTSR KLAMHIMARP TASCLLLQCT AAQGGRQPGA AMAPKDRVPL 60 VSAGLAVASL LLLLLCATRC EARAMAATAR RLSSSSSSPL LNALFKLNFI RTVEPARRIP 120 TAGDEEAASD INSPFCVNPP DAPSATTPPF KPFTPSFPGQ APQLPPITPV PPSFEPSPPA 180 PENGASGGGQ GGGQGQGGDQ GQGGGGDQGQ GGGQSQGGDQ GQGGGGGDQG QGGGQSQGGD 240 QGQGGGQGQG GSQGQGGGGG DQGQEGPPAS TTPNSPPQVG PGGIPFGSVP PSPIVVVPSP 300 PGSGPDPGSG LGGGGSGSDG GPFQPPIIYP PPLAPPLPPG AGQTLWCVAK PTVPDPIIQE 360 AMDYACGAGA GCDSILPSGS CYRPNTVLAH ASFAFNSYWQ QAKATGGTCD FGGTATIVTR 420 DPRCCNWGYR YKCSNL* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07983 | X8 | 6.0e-23 | 345 | 416 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 2.0e-32 | 345 | 422 | 78 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACF80478.2 | 0 | 52 | 422 | 1 | 371 | unknown [Zea mays] |
| RefSeq | NP_001131462.1 | 0 | 1 | 436 | 1 | 436 | hypothetical protein LOC100192797 [Zea mays] |
| RefSeq | NP_001141530.1 | 4e-24 | 52 | 142 | 1 | 93 | hypothetical protein LOC100273642 [Zea mays] |
| RefSeq | NP_001141530.1 | 0 | 269 | 422 | 171 | 318 | hypothetical protein LOC100273642 [Zea mays] |
| RefSeq | XP_002448511.1 | 0 | 267 | 422 | 248 | 416 | hypothetical protein SORBIDRAFT_06g028225 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2jon_A | 0.000000000000001 | 336 | 422 | 5 | 89 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
| Hydropathy |
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