| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G035377_T01 |
| Family | GT47 |
| Protein Properties | Length: 435 Molecular Weight: 49208 Isoelectric Point: 10.3089 |
| Chromosome | Chromosome/Scaffold: 1 Start: 2657650 End: 2660198 |
| Description | FRA8 homolog |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT47 | 77 | 373 | 0 |
| RVRIYVYDLPARFNRDWAAADARCSRHLFAAEVAVHEALLAYAGRAARPEDADLFFVPVYVSCNFSTPNGFPSLSHARGLLADAVDLVRARMPYWNRSAG ADHVFVASHDFGACFHPMEDVAIADGIPEFLKRSILLQTFGVQGHHVCQEVEHVVIPPHVPPEVAHELPEPEKAQRDIFAFFRGKMEVHPKNISGRFYSK KVRTELLQHYGRNRKFYLKRKRFDNYRSEMARSLFCLCPLGWAPWSPRLVESVLLGCIPVIIADDIRLPFPPVLQWQEISLQVAEKDIASLGMVLDH | |||
| Full Sequence |
|---|
| Protein Sequence Length: 435 Download |
| MRDPKPRRSQ AARTLAARLR KHSTLLLLLL WFALSLALFL SATPPSAAPL RRSSSFLRSK 60 PRALAATTTD AAAVAPRVRI YVYDLPARFN RDWAAADARC SRHLFAAEVA VHEALLAYAG 120 RAARPEDADL FFVPVYVSCN FSTPNGFPSL SHARGLLADA VDLVRARMPY WNRSAGADHV 180 FVASHDFGAC FHPMEDVAIA DGIPEFLKRS ILLQTFGVQG HHVCQEVEHV VIPPHVPPEV 240 AHELPEPEKA QRDIFAFFRG KMEVHPKNIS GRFYSKKVRT ELLQHYGRNR KFYLKRKRFD 300 NYRSEMARSL FCLCPLGWAP WSPRLVESVL LGCIPVIIAD DIRLPFPPVL QWQEISLQVA 360 EKDIASLGMV LDHVVATNLT VIQKNLWDPV KRRALVFNRP MEAGDATWQV LRELEVLLDQ 420 SRRRRSVGSY SWRR* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03016 | Exostosin | 5.0e-58 | 76 | 367 | 298 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAN62780.1 | 0 | 60 | 434 | 60 | 449 | Unknown protein [Oryza sativa Japonica Group] |
| GenBank | ACN26243.1 | 0 | 194 | 434 | 1 | 241 | unknown [Zea mays] |
| GenBank | ACN31903.1 | 0 | 1 | 433 | 1 | 427 | unknown [Zea mays] |
| RefSeq | NP_001048697.1 | 0 | 60 | 434 | 60 | 427 | Os03g0107900 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002468679.1 | 0 | 1 | 434 | 1 | 429 | hypothetical protein SORBIDRAFT_01g050110 [Sorghum bicolor] |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| xylogalacturonan biosynthesis | RXN-9589 | EC-2.4.2.41 | xylogalacturonan β-1,3-xylosyltransferase |
