| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G037411_T01 |
| Family | CE8 |
| Protein Properties | Length: 367 Molecular Weight: 39049.2 Isoelectric Point: 9.1844 |
| Chromosome | Chromosome/Scaffold: 7 Start: 164829922 End: 164833174 |
| Description | Pectin lyase-like superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 69 | 359 | 0 |
| IVVAQDGTGHSRTVQGAVDMVPAGNSRRVKILVRPGVYREKVTVPITKPFVSLIGMGSGRTVITWNARASDMDRSGHQVGTFYSASVAVEADYFCASHIT FENSAPAAPPGAVGQQAVALRLSGDKTMLYRCRILGTQDTLFDNIGRHFLYNCDIQGSIDFIFGNARSLYQGCTLHAVATSYGAIAASQRSSAEEDSGFS FVGCRLTGSGMLYLGRAWGRYARVVYSYCDLGGIVVPQGWSDWGDQSRTKTVLFGEYSCKGPGASTRNRVPWSRSLTYDEARPFLGPSFIN | |||
| Full Sequence |
|---|
| Protein Sequence Length: 367 Download |
| MVAAAGRRRR RCAAAILLVL PVVAVLASSS AAADGSFITW DDLSTPSAAA VQGGVKAASG 60 GGARELDTIV VAQDGTGHSR TVQGAVDMVP AGNSRRVKIL VRPGVYREKV TVPITKPFVS 120 LIGMGSGRTV ITWNARASDM DRSGHQVGTF YSASVAVEAD YFCASHITFE NSAPAAPPGA 180 VGQQAVALRL SGDKTMLYRC RILGTQDTLF DNIGRHFLYN CDIQGSIDFI FGNARSLYQG 240 CTLHAVATSY GAIAASQRSS AEEDSGFSFV GCRLTGSGML YLGRAWGRYA RVVYSYCDLG 300 GIVVPQGWSD WGDQSRTKTV LFGEYSCKGP GASTRNRVPW SRSLTYDEAR PFLGPSFING 360 EQWLRL* 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02432 | PLN02432 | 7.0e-102 | 69 | 365 | 297 | + putative pectinesterase | ||
| PLN02634 | PLN02634 | 9.0e-104 | 69 | 364 | 297 | + probable pectinesterase | ||
| PLN02665 | PLN02665 | 2.0e-107 | 68 | 364 | 299 | + pectinesterase family protein | ||
| PLN02682 | PLN02682 | 4.0e-130 | 68 | 366 | 300 | + pectinesterase family protein | ||
| PLN02671 | PLN02671 | 5.0e-141 | 37 | 366 | 332 | + pectinesterase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EEC82420.1 | 0 | 34 | 366 | 30 | 399 | hypothetical protein OsI_26811 [Oryza sativa Indica Group] |
| GenBank | EEE67559.1 | 0 | 34 | 366 | 30 | 398 | hypothetical protein OsJ_25062 [Oryza sativa Japonica Group] |
| RefSeq | NP_001060235.1 | 0 | 34 | 318 | 30 | 324 | Os07g0607400 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002463165.1 | 0 | 33 | 318 | 22 | 314 | hypothetical protein SORBIDRAFT_02g038910 [Sorghum bicolor] |
| RefSeq | XP_002522727.1 | 0 | 1 | 366 | 16 | 383 | Pectinesterase U1 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 69 | 365 | 9 | 309 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 1.4013e-45 | 70 | 365 | 6 | 305 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 3uw0_A | 3e-17 | 50 | 290 | 21 | 281 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 1qjv_B | 0.000000000000003 | 80 | 243 | 19 | 190 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1qjv_A | 0.000000000000003 | 80 | 243 | 19 | 190 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
