| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G043943_T01 |
| Family | CE8 |
| Protein Properties | Length: 411 Molecular Weight: 44191.2 Isoelectric Point: 9.795 |
| Chromosome | Chromosome/Scaffold: 6 Start: 160333154 End: 160335343 |
| Description | Pectin lyase-like superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CE8 | 113 | 404 | 0 |
| VVDKNPGAGNFTSIQAAVDSLPLINLARVVIRVNAGTYTEKVSISPMRAFVTVEGAGADKTVVQWGDTADTAGAWGRPMGTFGSATFAVNSMFFVAKNIT FKNTAPVPRPGALGKQGVALRISADSAAFVGCNFLGAQDTLYDHLGRHYYRDCYIEGSVDFIFGNALSLYEGCHVHAIARNYGALTAQSRQSLLEDTGFS FVSCRVTGSGALYLGRAWGTFSRVVFAYTYMDNIIIPRGWYNWGDPTREMTVFYGQYKCTGPGANYAGRVQWSRELTDDEAKPFISLDFIDG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 411 Download |
| MALPSRARLL LLLCFVAAAA LLVAPGEVSA TAAAADAGGH GKRRGHSTHT RRLRPGKGAA 60 AAKPYPANAA RVEAIERQFA RWVRSMGGHG HNSSSTAYSR ALSRASLPAR TLVVDKNPGA 120 GNFTSIQAAV DSLPLINLAR VVIRVNAGTY TEKVSISPMR AFVTVEGAGA DKTVVQWGDT 180 ADTAGAWGRP MGTFGSATFA VNSMFFVAKN ITFKNTAPVP RPGALGKQGV ALRISADSAA 240 FVGCNFLGAQ DTLYDHLGRH YYRDCYIEGS VDFIFGNALS LYEGCHVHAI ARNYGALTAQ 300 SRQSLLEDTG FSFVSCRVTG SGALYLGRAW GTFSRVVFAY TYMDNIIIPR GWYNWGDPTR 360 EMTVFYGQYK CTGPGANYAG RVQWSRELTD DEAKPFISLD FIDGFEWLRL * 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02432 | PLN02432 | 4.0e-111 | 108 | 409 | 302 | + putative pectinesterase | ||
| PLN02634 | PLN02634 | 8.0e-112 | 110 | 408 | 300 | + probable pectinesterase | ||
| PLN02304 | PLN02304 | 3.0e-117 | 111 | 409 | 307 | + probable pectinesterase | ||
| PLN02665 | PLN02665 | 5.0e-119 | 101 | 408 | 310 | + pectinesterase family protein | ||
| PLN02682 | PLN02682 | 0 | 71 | 410 | 340 | + pectinesterase family protein | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACR36293.1 | 0 | 1 | 410 | 1 | 391 | unknown [Zea mays] |
| GenBank | EEC79546.1 | 0 | 50 | 410 | 43 | 398 | hypothetical protein OsI_20666 [Oryza sativa Indica Group] |
| RefSeq | NP_001044216.1 | 0 | 7 | 410 | 4 | 384 | Os01g0743200 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001056077.1 | 0 | 50 | 410 | 43 | 398 | Os05g0521600 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002440102.1 | 0 | 48 | 410 | 42 | 406 | hypothetical protein SORBIDRAFT_09g026060 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 113 | 409 | 9 | 309 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 8.96831e-44 | 119 | 409 | 11 | 305 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 3uw0_A | 5e-27 | 113 | 401 | 34 | 361 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 2ntq_B | 4e-16 | 96 | 396 | 2 | 328 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 2ntq_A | 4e-16 | 96 | 396 | 2 | 328 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
