| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G044744_T01 |
| Family | GT5 |
| Protein Properties | Length: 910 Molecular Weight: 103101 Isoelectric Point: 6.427 |
| Chromosome | Chromosome/Scaffold: 8 Start: 125308562 End: 125317107 |
| Description | starch synthase 4 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT5 | 417 | 900 | 0 |
| HIVHIAAEMAPVAKVGGLADVISGLGKALQKKGHLVEIILPKYDCMQHNQINNLKVLDVVVKSYFEGNMFANKIWTGTVEGLPVYFIEPQHPGKFFWRAQ YYGEHDDFKRFSYFSRVALELLYQSGKKVDIIHCHDWQTAFVAPLYWDVYANLGFNSARICFTCHNFEYQGIAPAQDLAYCGLDVDHLDRPDRMRDNSHG RINVVKGAVVYSNIVTTVSPTYAQEVRSEGGRGLQDTLKVHSKKFVGILNGIDTDTWNPSTDRFLKVQYSANDLYGKSANKAALRKQLKLASTQASQPLV GCITRLVPQKGVHLIRHAIYKITELGGQFVLLGSSPVQHIQREFEGIADQFQNNNNVRLLLKYDDALAHMIFAASDMFIVPSMFEPCGLTQMVAMRYGSV PVVRRTGGLNDSVFDLDDETIPMEVRNGFTFLKADEQDFGNALERAFNYYHRKPEVWKQLVQKDMKIDFSWDTSVSQYEEIYQK | |||
| Full Sequence |
|---|
| Protein Sequence Length: 910 Download |
| MSCSAAAGAE ATALLFRSAA PSTIVGRHRL AMSRRTSRRN LRTGVHPHQK SAPSANHRNR 60 ASIQRDRASA SIDEEQKQMS EDENGLLDIQ LEDLVGMIQN TQKNILLLNQ ARLQALERAD 120 KILKEKETLQ QKINILEMKL SETGKQSVLS SEVKSDEESL EFDVVKEENM LLKDEMNFLK 180 GKLIEITETE ESLFKLEKEC ALLNASLREL ECTSTSAQSD VLKLGPLQQD AWWEKVENLE 240 DLLDSTANQV EHASLTLDGY RDFQDKVDKL KASLGTTNVS EFCLYLVDIL QQRVKSVEER 300 FQACNHEMHS QIELYEHSIV EFHGTLSKLI NESEKKSMEH YAEGMPSEFW SRISLLIDGW 360 SLEKKISIND ASMLREMAWK RDNRLREAYL SSRGMEEREL IDSFLKMALP GTSSGLHIVH 420 IAAEMAPVAK VGGLADVISG LGKALQKKGH LVEIILPKYD CMQHNQINNL KVLDVVVKSY 480 FEGNMFANKI WTGTVEGLPV YFIEPQHPGK FFWRAQYYGE HDDFKRFSYF SRVALELLYQ 540 SGKKVDIIHC HDWQTAFVAP LYWDVYANLG FNSARICFTC HNFEYQGIAP AQDLAYCGLD 600 VDHLDRPDRM RDNSHGRINV VKGAVVYSNI VTTVSPTYAQ EVRSEGGRGL QDTLKVHSKK 660 FVGILNGIDT DTWNPSTDRF LKVQYSANDL YGKSANKAAL RKQLKLASTQ ASQPLVGCIT 720 RLVPQKGVHL IRHAIYKITE LGGQFVLLGS SPVQHIQREF EGIADQFQNN NNVRLLLKYD 780 DALAHMIFAA SDMFIVPSMF EPCGLTQMVA MRYGSVPVVR RTGGLNDSVF DLDDETIPME 840 VRNGFTFLKA DEQDFGNALE RAFNYYHRKP EVWKQLVQKD MKIDFSWDTS VSQYEEIYQK 900 TATRARAAA* 960 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG0297 | GlgA | 2.0e-143 | 418 | 900 | 493 | + Glycogen synthase [Carbohydrate transport and metabolism] | ||
| PLN02939 | PLN02939 | 0 | 17 | 900 | 949 | + transferase, transferring glycosyl groups | ||
| TIGR02095 | glgA | 0 | 416 | 900 | 490 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| cd03791 | GT1_Glycogen_synthase_DULL1_like | 0 | 417 | 900 | 487 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
| PRK00654 | glgA | 0 | 416 | 900 | 487 | + glycogen synthase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009058 | biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAK97773.1 | 0 | 1 | 900 | 1 | 905 | starch synthase isoform IV [Triticum aestivum] |
| GenBank | ABD64538.1 | 0 | 1 | 900 | 1 | 905 | starch synthase IV [Triticum aestivum] |
| RefSeq | NP_001056142.1 | 0 | 14 | 899 | 13 | 905 | Os05g0533600 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001123590.1 | 0 | 1 | 900 | 1 | 900 | starch synthase IV [Zea mays] |
| RefSeq | XP_002440128.1 | 0 | 1 | 899 | 1 | 899 | hypothetical protein SORBIDRAFT_09g026570 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d1j_A | 0 | 416 | 900 | 1 | 475 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 3guh_A | 0 | 416 | 900 | 1 | 475 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 2r4u_A | 0 | 416 | 900 | 1 | 475 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 2r4t_A | 0 | 416 | 900 | 1 | 475 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 2qzs_A | 0 | 416 | 900 | 1 | 475 | A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With Adp And Glucose(Wtgsb) |
| Hydropathy |
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