| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G048375_T01 |
| Family | GH10 |
| Protein Properties | Length: 596 Molecular Weight: 64921.1 Isoelectric Point: 5.3381 |
| Chromosome | Chromosome/Scaffold: 9 Start: 147979866 End: 147983004 |
| Description | Glycosyl hydrolase family 10 protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH10 | 245 | 507 | 0 |
| RTNFPLGAAVSRYILTNSAYQTWFASRFAVATFENEMKWYSTEPAPGQEDYTVPDAMMAFAKSNGIAVRGHNVFWDQPSQQPRWVQSLPYPQLLAAASRR IRSVVSRYAGQVIGWDVVNENLHFNFYEGRFGWDASTAFYAAARLLDAGSALMFMNEFNTVEQPGDMAALPARYLQRLQQIIAAYPENGAGMAIGLEGHF TTNPNIPYMRAALDTLAQAGIPVWLTEVDVAPGPSQAQHLEEVLREAYAHPAVQGIVIWSAWR | |||
| Full Sequence |
|---|
| Protein Sequence Length: 596 Download |
| MVCFACRSVE TECLPCRDRM TKAKLAFWLG WIALLQGCMV KSSLPYEYDY SASIECLPEP 60 LEPQYGGGVL RNADFSAGLR GWSAFGYGSI AESTSAAGNG FAVALNRTRP YQSVSQKVYL 120 QADTHYTLSA WLQVSDGGAD VRAVVKTVGD FVHAGGGVAK AGCWSMLKGG LTAASSGPAE 180 LYFESNATVD LWVDSVSLKP FSKDEWTAHR AESVSAARKK AVRLQATDSA GNPLEGAAVS 240 LDAVRTNFPL GAAVSRYILT NSAYQTWFAS RFAVATFENE MKWYSTEPAP GQEDYTVPDA 300 MMAFAKSNGI AVRGHNVFWD QPSQQPRWVQ SLPYPQLLAA ASRRIRSVVS RYAGQVIGWD 360 VVNENLHFNF YEGRFGWDAS TAFYAAARLL DAGSALMFMN EFNTVEQPGD MAALPARYLQ 420 RLQQIIAAYP ENGAGMAIGL EGHFTTNPNI PYMRAALDTL AQAGIPVWLT EVDVAPGPSQ 480 AQHLEEVLRE AYAHPAVQGI VIWSAWRPEG CYVMCLTDNS FNNLPQGDVV DRLIAEWRAT 540 PRAGSTDAQG YFEAELVHGE YKVTVSHPAL NSSISRSVKV ELGSGSDHYF IDMQV* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02018 | CBM_4_9 | 1.0e-5 | 67 | 185 | 129 | + Carbohydrate binding domain. This family includes diverse carbohydrate binding domains. | ||
| COG3693 | XynA | 2.0e-25 | 243 | 503 | 285 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
| pfam00331 | Glyco_hydro_10 | 2.0e-41 | 240 | 522 | 311 | + Glycosyl hydrolase family 10. | ||
| smart00633 | Glyco_10 | 4.0e-64 | 281 | 530 | 275 | + Glycosyl hydrolase family 10. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| GO:0016798 | hydrolase activity, acting on glycosyl bonds |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABF94504.1 | 0 | 24 | 593 | 3 | 567 | Glycosyl hydrolase family 10 protein, expressed [Oryza sativa (japonica cultivar-group)] |
| GenBank | ACG36704.1 | 0 | 20 | 595 | 1 | 576 | 1,4-beta-xylanase [Zea mays] |
| GenBank | ACL53134.1 | 0 | 56 | 595 | 16 | 555 | unknown [Zea mays] |
| RefSeq | NP_001130600.1 | 0 | 1 | 595 | 1 | 595 | hypothetical protein LOC100191699 [Zea mays] |
| RefSeq | XP_002468320.1 | 0 | 24 | 595 | 10 | 573 | hypothetical protein SORBIDRAFT_01g043760 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1nq6_A | 6e-29 | 250 | 530 | 15 | 298 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
| PDB | 1v0n_A | 2e-23 | 250 | 520 | 16 | 288 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
| PDB | 1v0m_A | 2e-23 | 250 | 520 | 16 | 288 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
| PDB | 1v0l_A | 2e-23 | 250 | 520 | 16 | 288 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
| PDB | 1v0k_A | 2e-23 | 250 | 520 | 16 | 288 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| (1,4)-β-xylan degradation | 3.2.1.8-RXN | EC-3.2.1.8 | endo-1,4-β-xylanase |
| Hydropathy |
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