| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G048375_T02 |
| Family | GH10 |
| Protein Properties | Length: 577 Molecular Weight: 62720.5 Isoelectric Point: 5.3186 |
| Chromosome | Chromosome/Scaffold: 9 Start: 147979901 End: 147983004 |
| Description | Glycosyl hydrolase family 10 protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH10 | 226 | 488 | 0 |
| RTNFPLGAAVSRYILTNSAYQTWFASRFAVATFENEMKWYSTEPAPGQEDYTVPDAMMAFAKSNGIAVRGHNVFWDQPSQQPRWVQSLPYPQLLAAASRR IRSVVSRYAGQVIGWDVVNENLHFNFYEGRFGWDASTAFYAAARLLDAGSALMFMNEFNTVEQPGDMAALPARYLQRLQQIIAAYPENGAGMAIGLEGHF TTNPNIPYMRAALDTLAQAGIPVWLTEVDVAPGPSQAQHLEEVLREAYAHPAVQGIVIWSAWR | |||
| Full Sequence |
|---|
| Protein Sequence Length: 577 Download |
| MTKAKLAFWL GWIALLQGCM VKSSLPYEYD YSASIECLPE PLEPQYGGGV LRNADFSAGL 60 RGWSAFGYGS IAESTSAAGN GFAVALNRTR PYQSVSQKVY LQADTHYTLS AWLQVSDGGA 120 DVRAVVKTVG DFVHAGGGVA KAGCWSMLKG GLTAASSGPA ELYFESNATV DLWVDSVSLK 180 PFSKDEWTAH RAESVSAARK KAVRLQATDS AGNPLEGAAV SLDAVRTNFP LGAAVSRYIL 240 TNSAYQTWFA SRFAVATFEN EMKWYSTEPA PGQEDYTVPD AMMAFAKSNG IAVRGHNVFW 300 DQPSQQPRWV QSLPYPQLLA AASRRIRSVV SRYAGQVIGW DVVNENLHFN FYEGRFGWDA 360 STAFYAAARL LDAGSALMFM NEFNTVEQPG DMAALPARYL QRLQQIIAAY PENGAGMAIG 420 LEGHFTTNPN IPYMRAALDT LAQAGIPVWL TEVDVAPGPS QAQHLEEVLR EAYAHPAVQG 480 IVIWSAWRPE GCYVMCLTDN SFNNLPQGDV VDRLIAEWRA TPRAGSTDAQ GYFEAELVHG 540 EYKVTVSHPA LNSSISRSVK VELGSGSDHY FIDMQV* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02018 | CBM_4_9 | 2.0e-5 | 48 | 166 | 129 | + Carbohydrate binding domain. This family includes diverse carbohydrate binding domains. | ||
| COG3693 | XynA | 5.0e-25 | 224 | 484 | 285 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
| pfam00331 | Glyco_hydro_10 | 5.0e-41 | 221 | 503 | 311 | + Glycosyl hydrolase family 10. | ||
| smart00633 | Glyco_10 | 1.0e-63 | 262 | 511 | 275 | + Glycosyl hydrolase family 10. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| GO:0016798 | hydrolase activity, acting on glycosyl bonds |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABF94504.1 | 0 | 5 | 574 | 3 | 567 | Glycosyl hydrolase family 10 protein, expressed [Oryza sativa (japonica cultivar-group)] |
| GenBank | ACG36704.1 | 0 | 1 | 576 | 1 | 576 | 1,4-beta-xylanase [Zea mays] |
| GenBank | ACL53134.1 | 0 | 37 | 576 | 16 | 555 | unknown [Zea mays] |
| RefSeq | NP_001130600.1 | 0 | 1 | 576 | 20 | 595 | hypothetical protein LOC100191699 [Zea mays] |
| RefSeq | XP_002468320.1 | 0 | 5 | 576 | 10 | 573 | hypothetical protein SORBIDRAFT_01g043760 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1nq6_A | 4e-29 | 231 | 511 | 15 | 298 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
| PDB | 1v0n_A | 2e-23 | 231 | 501 | 16 | 288 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
| PDB | 1v0m_A | 2e-23 | 231 | 501 | 16 | 288 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
| PDB | 1v0l_A | 2e-23 | 231 | 501 | 16 | 288 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
| PDB | 1v0k_A | 2e-23 | 231 | 501 | 16 | 288 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| (1,4)-β-xylan degradation | 3.2.1.8-RXN | EC-3.2.1.8 | endo-1,4-β-xylanase |
