| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G048375_T03 |
| Family | GH10 |
| Protein Properties | Length: 626 Molecular Weight: 68447.1 Isoelectric Point: 5.9945 |
| Chromosome | Chromosome/Scaffold: 9 Start: 147979958 End: 147983004 |
| Description | Glycosyl hydrolase family 10 protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH10 | 275 | 537 | 0 |
| RTNFPLGAAVSRYILTNSAYQTWFASRFAVATFENEMKWYSTEPAPGQEDYTVPDAMMAFAKSNGIAVRGHNVFWDQPSQQPRWVQSLPYPQLLAAASRR IRSVVSRYAGQVIGWDVVNENLHFNFYEGRFGWDASTAFYAAARLLDAGSALMFMNEFNTVEQPGDMAALPARYLQRLQQIIAAYPENGAGMAIGLEGHF TTNPNIPYMRAALDTLAQAGIPVWLTEVDVAPGPSQAQHLEEVLREAYAHPAVQGIVIWSAWR | |||
| Full Sequence |
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| Protein Sequence Length: 626 Download |
| MPFRGPERRP RSCTLWSLSL RLTLSTAPQT QQPRTRESVE TECLPCRDRM TKAKLAFWLG 60 WIALLQGCMV KSSLPYEYDY SASIECLPEP LEPQYGGGVL RNADFSAGLR GWSAFGYGSI 120 AESTSAAGNG FAVALNRTRP YQSVSQKVYL QADTHYTLSA WLQVSDGGAD VRAVVKTVGD 180 FVHAGGGVAK AGCWSMLKGG LTAASSGPAE LYFESNATVD LWVDSVSLKP FSKDEWTAHR 240 AESVSAARKK AVRLQATDSA GNPLEGAAVS LDAVRTNFPL GAAVSRYILT NSAYQTWFAS 300 RFAVATFENE MKWYSTEPAP GQEDYTVPDA MMAFAKSNGI AVRGHNVFWD QPSQQPRWVQ 360 SLPYPQLLAA ASRRIRSVVS RYAGQVIGWD VVNENLHFNF YEGRFGWDAS TAFYAAARLL 420 DAGSALMFMN EFNTVEQPGD MAALPARYLQ RLQQIIAAYP ENGAGMAIGL EGHFTTNPNI 480 PYMRAALDTL AQAGIPVWLT EVDVAPGPSQ AQHLEEVLRE AYAHPAVQGI VIWSAWRPEG 540 CYVMCLTDNS FNNLPQGDVV DRLIAEWRAT PRAGSTDAQG YFEAELVHGE YKVTVSHPAL 600 NSSISRSVKV ELGSGSDHYF IDMQV* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02018 | CBM_4_9 | 1.0e-5 | 97 | 215 | 129 | + Carbohydrate binding domain. This family includes diverse carbohydrate binding domains. | ||
| COG3693 | XynA | 3.0e-25 | 273 | 533 | 285 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
| pfam00331 | Glyco_hydro_10 | 8.0e-42 | 270 | 552 | 311 | + Glycosyl hydrolase family 10. | ||
| smart00633 | Glyco_10 | 3.0e-64 | 311 | 560 | 275 | + Glycosyl hydrolase family 10. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| GO:0016798 | hydrolase activity, acting on glycosyl bonds |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABF94504.1 | 0 | 54 | 623 | 3 | 567 | Glycosyl hydrolase family 10 protein, expressed [Oryza sativa (japonica cultivar-group)] |
| GenBank | ACG36704.1 | 0 | 50 | 625 | 1 | 576 | 1,4-beta-xylanase [Zea mays] |
| GenBank | ACL53134.1 | 0 | 86 | 625 | 16 | 555 | unknown [Zea mays] |
| RefSeq | NP_001130600.1 | 0 | 38 | 625 | 8 | 595 | hypothetical protein LOC100191699 [Zea mays] |
| RefSeq | XP_002468320.1 | 0 | 54 | 625 | 10 | 573 | hypothetical protein SORBIDRAFT_01g043760 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1nq6_A | 9e-29 | 280 | 560 | 15 | 298 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
| PDB | 1v0n_A | 2e-23 | 280 | 550 | 16 | 288 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
| PDB | 1v0m_A | 2e-23 | 280 | 550 | 16 | 288 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
| PDB | 1v0l_A | 2e-23 | 280 | 550 | 16 | 288 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
| PDB | 1v0k_A | 2e-23 | 280 | 550 | 16 | 288 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| (1,4)-β-xylan degradation | 3.2.1.8-RXN | EC-3.2.1.8 | endo-1,4-β-xylanase |
| Hydropathy |
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