| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G048375_T05 |
| Family | GH10 |
| Protein Properties | Length: 431 Molecular Weight: 47216 Isoelectric Point: 5.0029 |
| Chromosome | Chromosome/Scaffold: 9 Start: 147979786 End: 147981553 |
| Description | Glycosyl hydrolase family 10 protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH10 | 80 | 342 | 0 |
| RTNFPLGAAVSRYILTNSAYQTWFASRFAVATFENEMKWYSTEPAPGQEDYTVPDAMMAFAKSNGIAVRGHNVFWDQPSQQPRWVQSLPYPQLLAAASRR IRSVVSRYAGQVIGWDVVNENLHFNFYEGRFGWDASTAFYAAARLLDAGSALMFMNEFNTVEQPGDMAALPARYLQRLQQIIAAYPENGAGMAIGLEGHF TTNPNIPYMRAALDTLAQAGIPVWLTEVDVAPGPSQAQHLEEVLREAYAHPAVQGIVIWSAWR | |||
| Full Sequence |
|---|
| Protein Sequence Length: 431 Download |
| MLKGGLTAAS SGPAELYFES NATVDLWVDS VSLKPFSKDE WTAHRAESVS AARKKAVRLQ 60 ATDSAGNPLE GAAVSLDAVR TNFPLGAAVS RYILTNSAYQ TWFASRFAVA TFENEMKWYS 120 TEPAPGQEDY TVPDAMMAFA KSNGIAVRGH NVFWDQPSQQ PRWVQSLPYP QLLAAASRRI 180 RSVVSRYAGQ VIGWDVVNEN LHFNFYEGRF GWDASTAFYA AARLLDAGSA LMFMNEFNTV 240 EQPGDMAALP ARYLQRLQQI IAAYPENGAG MAIGLEGHFT TNPNIPYMRA ALDTLAQAGI 300 PVWLTEVDVA PGPSQAQHLE EVLREAYAHP AVQGIVIWSA WRPEGCYVMC LTDNSFNNLP 360 QGDVVDRLIA EWRATPRAGS TDAQGYFEAE LVHGEYKVTV SHPALNSSIS RSVKVELGSG 420 SDHYFIDMQV * 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3693 | XynA | 2.0e-25 | 78 | 338 | 285 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
| pfam00331 | Glyco_hydro_10 | 1.0e-41 | 75 | 357 | 311 | + Glycosyl hydrolase family 10. | ||
| smart00633 | Glyco_10 | 9.0e-65 | 116 | 365 | 275 | + Glycosyl hydrolase family 10. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACG36704.1 | 0 | 1 | 430 | 147 | 576 | 1,4-beta-xylanase [Zea mays] |
| GenBank | ACL53134.1 | 0 | 1 | 430 | 126 | 555 | unknown [Zea mays] |
| GenBank | ACL53900.1 | 0 | 1 | 430 | 1 | 430 | unknown [Zea mays] |
| RefSeq | NP_001130600.1 | 0 | 1 | 430 | 166 | 595 | hypothetical protein LOC100191699 [Zea mays] |
| RefSeq | XP_002468320.1 | 0 | 1 | 430 | 145 | 573 | hypothetical protein SORBIDRAFT_01g043760 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1nq6_A | 8e-30 | 85 | 365 | 15 | 298 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
| PDB | 1v0n_A | 5e-24 | 85 | 355 | 16 | 288 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
| PDB | 1v0m_A | 5e-24 | 85 | 355 | 16 | 288 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
| PDB | 1v0l_A | 5e-24 | 85 | 355 | 16 | 288 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
| PDB | 1v0k_A | 5e-24 | 85 | 355 | 16 | 288 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| (1,4)-β-xylan degradation | 3.2.1.8-RXN | EC-3.2.1.8 | endo-1,4-β-xylanase |
| Hydropathy |
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