| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G048375_T06 |
| Family | GH10 |
| Protein Properties | Length: 393 Molecular Weight: 43026.3 Isoelectric Point: 5.0721 |
| Chromosome | Chromosome/Scaffold: 9 Start: 147979831 End: 147981553 |
| Description | Glycosyl hydrolase family 10 protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH10 | 80 | 306 | 0 |
| RTNFPLGAAVSRYILTNSAYQTWFASRFAVATFENEMKWYSTEPAPGQEDYTVPDAMMAFAKSNGIAVRGHNVFWDQPSQQPRWVQSLPYPQLLAAASRR IRSVVSRYAGQVIGWDVVNENLHFNFYEGRFGWDASTAFYAAARLLDAGSALMFMNEFNTVEQPGDMAALPARYLQRLQQIIAAYPENGAGMAIGLEGHF TTNPNIPYMRAALDTLAQAGIPVWLTE | |||
| Full Sequence |
|---|
| Protein Sequence Length: 393 Download |
| MLKGGLTAAS SGPAELYFES NATVDLWVDS VSLKPFSKDE WTAHRAESVS AARKKAVRLQ 60 ATDSAGNPLE GAAVSLDAVR TNFPLGAAVS RYILTNSAYQ TWFASRFAVA TFENEMKWYS 120 TEPAPGQEDY TVPDAMMAFA KSNGIAVRGH NVFWDQPSQQ PRWVQSLPYP QLLAAASRRI 180 RSVVSRYAGQ VIGWDVVNEN LHFNFYEGRF GWDASTAFYA AARLLDAGSA LMFMNEFNTV 240 EQPGDMAALP ARYLQRLQQI IAAYPENGAG MAIGLEGHFT TNPNIPYMRA ALDTLAQAGI 300 PVWLTEGCYV MCLTDNSFNN LPQGDVVDRL IAEWRATPRA GSTDAQGYFE AELVHGEYKV 360 TVSHPALNSS ISRSVKVELG SGSDHYFIDM QV* 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3693 | XynA | 7.0e-24 | 78 | 306 | 242 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
| pfam00331 | Glyco_hydro_10 | 2.0e-34 | 75 | 306 | 247 | + Glycosyl hydrolase family 10. | ||
| smart00633 | Glyco_10 | 3.0e-49 | 116 | 306 | 204 | + Glycosyl hydrolase family 10. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACG36704.1 | 0 | 1 | 392 | 147 | 576 | 1,4-beta-xylanase [Zea mays] |
| GenBank | ACL53134.1 | 0 | 1 | 392 | 126 | 555 | unknown [Zea mays] |
| GenBank | ACL53900.1 | 0 | 1 | 392 | 1 | 430 | unknown [Zea mays] |
| RefSeq | NP_001130600.1 | 0 | 1 | 392 | 166 | 595 | hypothetical protein LOC100191699 [Zea mays] |
| RefSeq | XP_002468320.1 | 0 | 1 | 392 | 145 | 573 | hypothetical protein SORBIDRAFT_01g043760 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1nq6_A | 3e-23 | 85 | 306 | 15 | 235 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
| PDB | 1xyf_B | 3e-20 | 85 | 306 | 16 | 236 | A Chain A, Endo-1,4-Beta-Xylanase From Streptomyces Olivaceoviridis |
| PDB | 1xyf_A | 3e-20 | 85 | 306 | 16 | 236 | A Chain A, Endo-1,4-Beta-Xylanase From Streptomyces Olivaceoviridis |
| PDB | 1v6x_B | 3e-20 | 85 | 306 | 16 | 236 | A Chain A, Endo-1,4-Beta-Xylanase From Streptomyces Olivaceoviridis |
| PDB | 1v6x_A | 3e-20 | 85 | 306 | 16 | 236 | A Chain A, Endo-1,4-Beta-Xylanase From Streptomyces Olivaceoviridis |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| (1,4)-β-xylan degradation | 3.2.1.8-RXN | EC-3.2.1.8 | endo-1,4-β-xylanase |
| Hydropathy |
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