CAZyme Information

Basic Information
SpeciesZea mays
Cazyme IDGRMZM2G052175_T01
FamilyGH19
Protein PropertiesLength: 234 Molecular Weight: 24438.5 Isoelectric Point: 7.7164
ChromosomeChromosome/Scaffold: 2 Start: 33537139 End: 33539360
Descriptionhomolog of carrot EP3-3 chitinase
View CDS
External Links
NCBI Taxonomy
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GH19322330
  VPSVVTEAFFDGIRSHARDGCEGKNFYTRSAFVSAAGAFPGFAHGGTEADGKREIAAFFAHVTFETGYFCYINQINGRGQASCDSGVKQWPCAPGKQYYG
  RGPLQISWNFNYGPAGQSIGFDALGDPDRVAQDPVISFKTALWLWMSSAHQVVPQGFGATIRALHGALECNGNSPATVNARVGYYKEYCKQFGVGPGNNL
  TC
Full Sequence
Protein Sequence     Length: 234     Download
MILTALALGL ALLAAASPCL GLGSSGSGGA SVPSVVTEAF FDGIRSHARD GCEGKNFYTR    60
SAFVSAAGAF PGFAHGGTEA DGKREIAAFF AHVTFETGYF CYINQINGRG QASCDSGVKQ    120
WPCAPGKQYY GRGPLQISWN FNYGPAGQSI GFDALGDPDR VAQDPVISFK TALWLWMSSA    180
HQVVPQGFGA TIRALHGALE CNGNSPATVN ARVGYYKEYC KQFGVGPGNN LTC*          240
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
COG3179COG31790.000712617651+
cd00442lysozyme_like1.0e-912217756+
pfam00182Glyco_hydro_192.0e-8635233232+
cd00325chitinase_glyco_hydro_192.0e-9036233230+
Gene Ontology
GO TermDescription
GO:0004568chitinase activity
GO:0006032chitin catabolic process
GO:0016998cell wall macromolecule catabolic process
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
GenBankACJ61929.101823359273chitinase [Zea mays subsp. parviglumis]
RefSeqNP_001148209.1012331233endochitinase A [Zea mays]
RefSeqXP_002448104.103223332232hypothetical protein SORBIDRAFT_06g021210 [Sorghum bicolor]
RefSeqXP_002448105.1022337271hypothetical protein SORBIDRAFT_06g021220 [Sorghum bicolor]
RefSeqXP_002448109.101823359272hypothetical protein SORBIDRAFT_06g021260 [Sorghum bicolor]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB3hbh_A03123312045 Chain 5, Trigger Factor Ribosome Binding Domain In Complex With 50s
PDB3hbe_X03123312045 Chain 5, Trigger Factor Ribosome Binding Domain In Complex With 50s
PDB3hbd_A0312331204A Chain A, Class Iv Chitinase Structure From Picea Abies At 1.8a
PDB4dyg_B0312332237A Chain A, Class Iv Chitinase Structure From Picea Abies At 1.8a
PDB4dyg_A0312332237A Chain A, Class Iv Chitinase Structure From Picea Abies At 1.8a
Signal Peptide
Cleavage Site
21
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
CK371077203322340
CF635941194412340
FL447523147882340
CB683115203322340
EE285981203322340