| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G054703_T01 |
| Family | GT47 |
| Protein Properties | Length: 480 Molecular Weight: 53199.6 Isoelectric Point: 9.4178 |
| Chromosome | Chromosome/Scaffold: 3 Start: 230434680 End: 230438299 |
| Description | exostosin family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GT47 | 94 | 417 | 0 |
| AAVRVFMYDMPPEFHFGLLGWSPPSPASVWPDVTDGSLPPPRYPGGLNQQHSVEYWLTLDLLSSSSFSLSPPCGRHSAVRVTDPRDADLVFVPFFASLSY NRHSRPLPPEKVGRDKALQEKLVGYLTARPEWRRFGGADHVIVAHHPNSLLHARAALSPAVFVLSDFGRYPPRVASLEKDVIAPYKHMAKTFVNDSAGFD DRPTLLYFRGAIYRKEGGTIRQELYYMLKDEKDVYFSFGSVQDHGASKASQGMHSSKFCLNIAGDTPSSNRMFDAIVSHCVPVIISDDIELPYEDVLDYS KFSIFVRSSDAVEKGHLMRLLSGV | |||
| Full Sequence |
|---|
| Protein Sequence Length: 480 Download |
| MAPRGRTLLL PLAAATVLVA STIFLFAAVG ARWRPADTGL PVPPDAFPTA VTIALPNATT 60 GKELSFLDEN GRPDDSSSAS ASGATAVRCD PRAAAVRVFM YDMPPEFHFG LLGWSPPSPA 120 SVWPDVTDGS LPPPRYPGGL NQQHSVEYWL TLDLLSSSSF SLSPPCGRHS AVRVTDPRDA 180 DLVFVPFFAS LSYNRHSRPL PPEKVGRDKA LQEKLVGYLT ARPEWRRFGG ADHVIVAHHP 240 NSLLHARAAL SPAVFVLSDF GRYPPRVASL EKDVIAPYKH MAKTFVNDSA GFDDRPTLLY 300 FRGAIYRKEG GTIRQELYYM LKDEKDVYFS FGSVQDHGAS KASQGMHSSK FCLNIAGDTP 360 SSNRMFDAIV SHCVPVIISD DIELPYEDVL DYSKFSIFVR SSDAVEKGHL MRLLSGVSKQ 420 RWTEMWSRLR EVDRHFEYQY PSQKDDAVQM IWRSLSRKVP SIKLKVHRSG RFSRSGRGK* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03016 | Exostosin | 5.0e-54 | 96 | 406 | 321 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABA91286.2 | 0 | 1 | 478 | 1 | 474 | secondary cell wall-related glycosyltransferase family 47, putative, expressed [Oryza sativa (japonica cultivar-group)] |
| GenBank | EEC67582.1 | 0 | 1 | 478 | 1 | 481 | hypothetical protein OsI_34941 [Oryza sativa Indica Group] |
| GenBank | EEE52679.1 | 0 | 43 | 479 | 96 | 528 | hypothetical protein OsJ_35064 [Oryza sativa Japonica Group] |
| RefSeq | NP_001066040.1 | 0 | 1 | 479 | 1 | 475 | Os12g0124400 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001151894.1 | 0 | 1 | 479 | 1 | 488 | secondary cell wall-related glycosyltransferase family 47 [Zea mays] |
