| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G058128_T01 |
| Family | CBM22 |
| Protein Properties | Length: 1097 Molecular Weight: 123146 Isoelectric Point: 7.0631 |
| Chromosome | Chromosome/Scaffold: 7 Start: 43121582 End: 43134716 |
| Description | glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM22 | 385 | 518 | 1.1e-29 |
| IIKNPHFEDGLKNWSGRGCNICRHEFSAYGNVRPLNGSYFASATGRVHNWNGIQQEITGRVQRKVLYEISSAVRIFGSANDTEVRATLWVQEYGRERYVG LAKNQTSDQQWTHLKGKFLLHAPFTKAVIFIEGP | |||
| CBM22 | 49 | 187 | 2.8e-30 |
| NILPNSDFSEGLHLWQSNSCHAFVAVEGSGYHYGVRPHSGSTYAVLTHRTQSWQGLEQDITEKVTLGTEYFVAAYVRVHGEVHEPIGVQVTLKLEEDGSS TNYLSIARILASQERWEKVEGSFNLTTLPRRLVFYLEGP | |||
| CBM22 | 214 | 352 | 4.3e-32 |
| NIILNYDFSKGLHPWNPIRCHAYVASQWSGFLDGIRGNSGENYAVVSKRTEHWQGLEQDITNQVSTGTVYVVSAFVRVDGIVQGQVEVKATLRLQNADGS THYNPVGSVVASKEKWNKLEGSFSLTNMPKNVVFYLEGP | |||
| CBM22 | 553 | 694 | 1.4e-38 |
| NLLHNNGFTRGLSGWSPMGSCRLSIQTEAPHMLPSILKDRASQKHISGHYILATNRTDVWMGPSQVITDKLRLHVTYRVSAWVRVGSGGHGRHHVNVCLA VDKNQWVNGGQVDADGDQWYEIKGAFKLEKQPSKVTAYVQGP | |||
| GH10 | 752 | 1032 | 0 |
| QTENSFPFGSCIARHNIENEDLAEFFVKNFNWAVFENELKWYHTEAEQGRLNYKDSDELLEFCEKHKIQVRGHCLFWEVEDAVQPWVQSLQGHHLMAAIQ NRLQSLLSRYKGRFRHHDVNNEMLHGSFYEDRLGRDIRAYMFREAHKLDPSAVLFVNDYNVEDGCDTKSTPEKLVEQVVDLQDRGAPVGGIGVQGHISHP VGEIICDSLDKLAILGLPIWITELDVTAENEHIRADDLEVFLREAFAHPAVGGIILWGFWEMFMFREHAHLVDADGTINEA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 1097 Download |
| MRRRCSWLSS LFRPRRADRS LPQPDPQGPD SEPKAIDKHS ASEEVVMDNI LPNSDFSEGL 60 HLWQSNSCHA FVAVEGSGYH YGVRPHSGST YAVLTHRTQS WQGLEQDITE KVTLGTEYFV 120 AAYVRVHGEV HEPIGVQVTL KLEEDGSSTN YLSIARILAS QERWEKVEGS FNLTTLPRRL 180 VFYLEGPPPG VDLLIDSVTI SYKKTASSVG GTENIILNYD FSKGLHPWNP IRCHAYVASQ 240 WSGFLDGIRG NSGENYAVVS KRTEHWQGLE QDITNQVSTG TVYVVSAFVR VDGIVQGQVE 300 VKATLRLQNA DGSTHYNPVG SVVASKEKWN KLEGSFSLTN MPKNVVFYLE GPPAGVDLVI 360 DSVTVACSRH KQSKEVKVPS GVETIIKNPH FEDGLKNWSG RGCNICRHEF SAYGNVRPLN 420 GSYFASATGR VHNWNGIQQE ITGRVQRKVL YEISSAVRIF GSANDTEVRA TLWVQEYGRE 480 RYVGLAKNQT SDQQWTHLKG KFLLHAPFTK AVIFIEGPPA GIDILVDGLV LSPARKLQAA 540 PCPKIENVLY GTNLLHNNGF TRGLSGWSPM GSCRLSIQTE APHMLPSILK DRASQKHISG 600 HYILATNRTD VWMGPSQVIT DKLRLHVTYR VSAWVRVGSG GHGRHHVNVC LAVDKNQWVN 660 GGQVDADGDQ WYEIKGAFKL EKQPSKVTAY VQGPPAGVDI RVMDFQIYAV DRKARFEYLK 720 EKTDKVRKRD VVLKFQGSNA VNLLGSSLRI QQTENSFPFG SCIARHNIEN EDLAEFFVKN 780 FNWAVFENEL KWYHTEAEQG RLNYKDSDEL LEFCEKHKIQ VRGHCLFWEV EDAVQPWVQS 840 LQGHHLMAAI QNRLQSLLSR YKGRFRHHDV NNEMLHGSFY EDRLGRDIRA YMFREAHKLD 900 PSAVLFVNDY NVEDGCDTKS TPEKLVEQVV DLQDRGAPVG GIGVQGHISH PVGEIICDSL 960 DKLAILGLPI WITELDVTAE NEHIRADDLE VFLREAFAHP AVGGIILWGF WEMFMFREHA 1020 HLVDADGTIN EAGRRYLALK QEWLTRMNGS VDHQGEFKFR GYHGSYTVEV NTPSGKVARS 1080 FVVDKDSPVQ VIALNV* 1140 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02018 | CBM_4_9 | 8.0e-16 | 385 | 520 | 138 | + Carbohydrate binding domain. This family includes diverse carbohydrate binding domains. | ||
| pfam02018 | CBM_4_9 | 1.0e-19 | 214 | 354 | 142 | + Carbohydrate binding domain. This family includes diverse carbohydrate binding domains. | ||
| COG3693 | XynA | 1.0e-40 | 744 | 1010 | 288 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
| pfam00331 | Glyco_hydro_10 | 3.0e-73 | 747 | 1040 | 314 | + Glycosyl hydrolase family 10. | ||
| smart00633 | Glyco_10 | 1.0e-76 | 790 | 1035 | 267 | + Glycosyl hydrolase family 10. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| GO:0016798 | hydrolase activity, acting on glycosyl bonds |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EAZ03745.1 | 0 | 34 | 1096 | 17 | 1082 | hypothetical protein OsI_25875 [Oryza sativa Indica Group] |
| GenBank | EAZ39688.1 | 0 | 34 | 1096 | 17 | 1082 | hypothetical protein OsJ_24125 [Oryza sativa Japonica Group] |
| RefSeq | NP_001059561.1 | 0 | 1 | 1096 | 1 | 1101 | Os07g0456700 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002301133.1 | 0 | 48 | 1091 | 1 | 1045 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002459803.1 | 0 | 1 | 1096 | 1 | 1098 | hypothetical protein SORBIDRAFT_02g010990 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1xyz_B | 2e-30 | 745 | 1014 | 25 | 311 | A Chain A, A Common Protein Fold And Similar Active Site In Two Distinct Families Of Beta-Glycanases |
| PDB | 1xyz_A | 2e-30 | 745 | 1014 | 25 | 311 | A Chain A, A Common Protein Fold And Similar Active Site In Two Distinct Families Of Beta-Glycanases |
| PDB | 1i1x_A | 1e-29 | 759 | 1030 | 18 | 289 | A Chain A, A Common Protein Fold And Similar Active Site In Two Distinct Families Of Beta-Glycanases |
| PDB | 1i1w_A | 1e-29 | 759 | 1030 | 18 | 289 | A Chain A, 0.89a Ultra High Resolution Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
| PDB | 2bnj_A | 2e-29 | 759 | 1030 | 18 | 289 | A Chain A, The Xylanase Ta From Thermoascus Aurantiacus Utilizes Arabinose Decorations Of Xylan As Significant Substrate Specificity Determinants |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| (1,4)-β-xylan degradation | 3.2.1.8-RXN | EC-3.2.1.8 | endo-1,4-β-xylanase |
| Hydropathy |
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